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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170751184
LUMI01000023
140963
Alphaproteobacteria
>WENV170752008
LUMI01023907
201940
Alphaproteobacteria
CAT
Met
>WENV170751196
LUMI01000031
197241
Alphaproteobacteria
GGG
Pro
>WENV170751577
LUMI01002838
197241
Alphaproteobacteria
GGG
Pro
>WENV170751186
LUMI01000023
481268
Alphaproteobacteria
TCC
Gly
>WENV170751361
LUMI01000555
481268
Alphaproteobacteria
TCC
Gly
>WENV170751978
LUMI01021139
314617
Alphaproteobacteria
TAC
Val
>WENV170751905
LUMI01015230
29702
Alphaproteobacteria
GGA
Ser
>WENV170752127
LUMI01038842
400544
Alphaproteobacteria
GGT
Thr
>WENV170751949
LUMI01018511
281650
Alphaproteobacteria
CCA
Trp
>WENV170751549
LUMI01002354
118213
Alphaproteobacteria
TAG
Leu
>WENV170751890
LUMI01014318
118213
Alphaproteobacteria
TAG
Leu
>WENV170751185
LUMI01000023
212319
Alphaproteobacteria
GTG
His
>WENV170751884
LUMI01014260
212319
Alphaproteobacteria
GTG
His
>WENV170752028
LUMI01026071
398994
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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