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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170753257
LUMJ01030370
281275
Gammaproteobacteria
TGT
Thr
>WENV170752496
LUMJ01001056
328691
Gammaproteobacteria
GGT
Thr
>WENV170752438
LUMJ01000767
20618
Gammaproteobacteria
GGA
Ser
>WENV170752262
LUMJ01000146
74240
Gammaproteobacteria
CAA
Leu
>WENV170752573
LUMJ01001565
329164
Gammaproteobacteria
TTT
Lys
>WENV170752227
LUMJ01000086
178471
Gammaproteobacteria
GTT
Asn
>WENV170752241
LUMJ01000102
480629
Gammaproteobacteria
GCA
Cys
>WENV170752608
LUMJ01001804
92638
Gammaproteobacteria
TAA
Leu
>WENV170752200
LUMJ01000030
176545
Gammaproteobacteria
CAT
Met
>WENV170752212
LUMJ01000049
401684
Gammaproteobacteria
CCT
Arg
>WENV170752371
LUMJ01000470
232119
Gammaproteobacteria
ACG
Arg
>WENV170752607
LUMJ01001804
481678
Gammaproteobacteria
GCA
Cys
>WENV170753113
LUMJ01017215
306288
Gammaproteobacteria
GCC
Gly
>WENV170752395
LUMJ01000598
176544
Gammaproteobacteria
CAT
Met
>WENV170752977
LUMJ01009228
209813
Gammaproteobacteria
GAT
Ile
>WENV170752956
LUMJ01008698
370389
Gammaproteobacteria
GGC
Ala
>WENV170753220
LUMJ01026094
180680
Gammaproteobacteria
GAC
Val
>WENV170753050
LUMJ01012940
180680
Gammaproteobacteria
GAC
Val
>WENV170752187
LUMJ01000012
180680
Gammaproteobacteria
GAC
Val
>WENV170752805
LUMJ01004716
176301
Gammaproteobacteria
GAT
Ile
>WENV170752381
LUMJ01000505
180678
Gammaproteobacteria
CCG
Arg
>WENV170753239
LUMJ01028238
180678
Gammaproteobacteria
CCG
Arg
>WENV170752394
LUMJ01000598
285547
Gammaproteobacteria
TTG
Gln
>WENV170752336
LUMJ01000339
285547
Gammaproteobacteria
TTG
Gln
>WENV170752351
LUMJ01000401
180681
Gammaproteobacteria
TGG
Pro
>WENV170752255
LUMJ01000121
180681
Gammaproteobacteria
TGG
Pro
>WENV170752569
LUMJ01001537
281791
Gammaproteobacteria
GTG
His
>WENV170752254
LUMJ01000121
118640
Gammaproteobacteria
TAG
Leu
>WENV170752297
LUMJ01000199
180679
Gammaproteobacteria
CCA
Trp
>WENV170752235
LUMJ01000099
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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