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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170754186
LUML01000695
232119
Gammaproteobacteria
ACG
Arg
>WENV170754421
LUML01007365
74240
Gammaproteobacteria
CAA
Leu
>WENV170754475
LUML01012003
176544
Gammaproteobacteria
CAT
Met
>WENV170754252
LUML01001355
180679
Gammaproteobacteria
CCA
Trp
>WENV170754273
LUML01001832
180678
Gammaproteobacteria
CCG
Arg
>WENV170754282
LUML01001872
401684
Gammaproteobacteria
CCT
Arg
>WENV170754185
LUML01000695
13452
Gammaproteobacteria
GCT
Ser
>WENV170754156
LUML01000390
370389
Gammaproteobacteria
GGC
Ala
>WENV170754201
LUML01000735
328691
Gammaproteobacteria
GGT
Thr
>WENV170754532
LUML01016645
178471
Gammaproteobacteria
GTT
Asn
>WENV170754476
LUML01012003
118640
Gammaproteobacteria
TAG
Leu
>WENV170754200
LUML01000735
400361
Gammaproteobacteria
TCC
Gly
>WENV170754397
LUML01006285
180681
Gammaproteobacteria
TGG
Pro
>WENV170754391
LUML01005811
285547
Gammaproteobacteria
TTG
Gln
>WENV170754477
LUML01012003
285547
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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