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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170755888
LUMO01000343
399001
Alphaproteobacteria
GAC
Val
>WENV170755946
LUMO01000862
399001
Alphaproteobacteria
GAC
Val
>WENV170756084
LUMO01004544
400930
Alphaproteobacteria
GAA
Phe
>WENV170755847
LUMO01000071
140963
Alphaproteobacteria
>WENV170756146
LUMO01008103
140963
Alphaproteobacteria
>WENV170756091
LUMO01004812
401037
Alphaproteobacteria
TTG
Gln
>WENV170756247
LUMO01014496
280788
Alphaproteobacteria
TTT
Lys
>WENV170755846
LUMO01000067
400384
Alphaproteobacteria
TTC
Glu
>WENV170756031
LUMO01003034
400514
Alphaproteobacteria
TTG
Gln
>WENV170756068
LUMO01004022
178509
Alphaproteobacteria
CCT
Arg
>WENV170756451
LUMO01037885
178509
Alphaproteobacteria
CCT
Arg
>WENV170756398
LUMO01029262
176153
Alphaproteobacteria
CAT
Met
>WENV170756345
LUMO01023623
400211
Alphaproteobacteria
>WENV170756234
LUMO01013885
118213
Alphaproteobacteria
TAG
Leu
>WENV170756408
LUMO01030432
118213
Alphaproteobacteria
TAG
Leu
>WENV170755990
LUMO01001821
400029
Alphaproteobacteria
GGT
Thr
>WENV170756309
LUMO01019042
398994
Alphaproteobacteria
GTT
Asn
>WENV170756121
LUMO01006981
178507
Alphaproteobacteria
GTG
His
>WENV170756342
LUMO01023379
29598
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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