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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170757210
LUMQ01000243
178510
Alphaproteobacteria
ACG
Arg
>WENV170757275
LUMQ01000531
140963
Alphaproteobacteria
>WENV170757557
LUMQ01003438
140963
Alphaproteobacteria
>WENV170757938
LUMQ01018960
201940
Alphaproteobacteria
CAT
Met
>WENV170757162
LUMQ01000085
197241
Alphaproteobacteria
GGG
Pro
>WENV170757283
LUMQ01000548
481268
Alphaproteobacteria
TCC
Gly
>WENV170757846
LUMQ01012415
481268
Alphaproteobacteria
TCC
Gly
>WENV170757927
LUMQ01018271
481268
Alphaproteobacteria
TCC
Gly
>WENV170758143
LUMQ01043277
314617
Alphaproteobacteria
TAC
Val
>WENV170757939
LUMQ01018990
29702
Alphaproteobacteria
GGA
Ser
>WENV170757478
LUMQ01002207
178509
Alphaproteobacteria
CCT
Arg
>WENV170757646
LUMQ01004976
118213
Alphaproteobacteria
TAG
Leu
>WENV170757868
LUMQ01014271
118213
Alphaproteobacteria
TAG
Leu
>WENV170757274
LUMQ01000531
212319
Alphaproteobacteria
GTG
His
>WENV170757604
LUMQ01004149
212319
Alphaproteobacteria
GTG
His
>WENV170757727
LUMQ01007374
398994
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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