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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170759262
LUMS01008638
190614
Alphaproteobacteria
TGG
Pro
>WENV170759312
LUMS01011594
178510
Alphaproteobacteria
ACG
Arg
>WENV170758795
LUMS01000001
296698
Alphaproteobacteria
CGC
Ala
>WENV170759399
LUMS01018494
296698
Alphaproteobacteria
CGC
Ala
>WENV170759102
LUMS01002429
446430
Alphaproteobacteria
CAC
Val
>WENV170759154
LUMS01004350
400848
Alphaproteobacteria
GAC
Val
>WENV170759461
LUMS01024685
176146
Alphaproteobacteria
CAT
Met
>WENV170759044
LUMS01001435
140876
Alphaproteobacteria
>WENV170759407
LUMS01019360
140876
Alphaproteobacteria
>WENV170759087
LUMS01002190
179390
Alphaproteobacteria
TGG
Pro
>WENV170758819
LUMS01000011
193463
Alphaproteobacteria
CCT
Arg
>WENV170758814
LUMS01000005
20437
Alphaproteobacteria
GGA
Ser
>WENV170759386
LUMS01017284
184691
Alphaproteobacteria
GTG
His
>WENV170758838
LUMS01000032
481802
Alphaproteobacteria
TCC
Gly
>WENV170759469
LUMS01025934
401037
Alphaproteobacteria
TTG
Gln
>WENV170759300
LUMS01010585
481073
Alphaproteobacteria
CTG
Gln
>WENV170759201
LUMS01005957
140893
Alphaproteobacteria
CAA
Leu
>WENV170759235
LUMS01007261
100185
Alphaproteobacteria
GAG
Leu
>WENV170759111
LUMS01002703
288727
Alphaproteobacteria
>WENV170759000
LUMS01000925
399480
Alphaproteobacteria
GAA
Phe
>WENV170758983
LUMS01000778
78115
Alphaproteobacteria
GAG
Leu
>WENV170758821
LUMS01000012
282977
Alphaproteobacteria
CAT
Met
>WENV170759130
LUMS01003464
180029
Alphaproteobacteria
CAT
Met
>WENV170759355
LUMS01015330
180029
Alphaproteobacteria
CAT
Met
>WENV170758797
LUMS01000003
427571
Alphaproteobacteria
GCC
Gly
>WENV170758997
LUMS01000898
29729
Alphaproteobacteria
GCT
Ser
>WENV170758810
LUMS01000004
192131
Alphaproteobacteria
GTC
Asp
>WENV170759423
LUMS01020716
281409
Alphaproteobacteria
TTT
Lys
>WENV170759226
LUMS01006714
368481
Alphaproteobacteria
TGC
Ala
>WENV170759364
LUMS01015528
435083
Alphaproteobacteria
>WENV170759105
LUMS01002521
178503
Alphaproteobacteria
GGG
Pro
>WENV170759187
LUMS01005465
29727
Alphaproteobacteria
CGA
Ser
>WENV170759360
LUMS01015496
118247
Alphaproteobacteria
CAA
Leu
>WENV170759135
LUMS01003625
29701
Alphaproteobacteria
CGA
Ser
>WENV170759177
LUMS01005192
29701
Alphaproteobacteria
CGA
Ser
>WENV170759200
LUMS01005925
283510
Alphaproteobacteria
TTT
Lys
>WENV170758815
LUMS01000006
400517
Alphaproteobacteria
GGT
Thr
>WENV170759199
LUMS01005885
281650
Alphaproteobacteria
CCA
Trp
>WENV170759225
LUMS01006714
234327
Alphaproteobacteria
GAT
Ile
>WENV170759421
LUMS01020486
400029
Alphaproteobacteria
GGT
Thr
>WENV170759106
LUMS01002548
398994
Alphaproteobacteria
GTT
Asn
>WENV170759185
LUMS01005462
399000
Alphaproteobacteria
TTC
Glu
>WENV170759159
LUMS01004764
29495
Alphaproteobacteria
GCT
Ser
>WENV170759266
LUMS01008998
281676
Alphaproteobacteria
TAC
Val
>WENV170758799
LUMS01000003
282981
Alphaproteobacteria
CCA
Trp
>WENV170759222
LUMS01006602
178507
Alphaproteobacteria
GTG
His
>WENV170759138
LUMS01003759
121990
Alphaproteobacteria
TAG
Leu
>WENV170759261
LUMS01008556
428327
Alphaproteobacteria
GCC
Gly
>WENV170758832
LUMS01000022
480900
Alphaproteobacteria
GCA
Cys
>WENV170759212
LUMS01006186
190609
Alphaproteobacteria
TCT
Arg
>WENV170759260
LUMS01008556
398996
Alphaproteobacteria
GCC
Gly
>WENV170759427
LUMS01021132
398996
Alphaproteobacteria
GCC
Gly
>WENV170758817
LUMS01000009
118150
Alphaproteobacteria
TAG
Leu
>WENV170759063
LUMS01001799
283257
Alphaproteobacteria
TTT
Lys
>WENV170759143
LUMS01003855
73523
Alphaproteobacteria
CAG
Leu
>WENV170758826
LUMS01000016
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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