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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170760714
LUMU01000005
193373
Alphaproteobacteria
CGG
Pro
>WENV170760954
LUMU01002173
179841
Alphaproteobacteria
CCT
Arg
>WENV170760733
LUMU01000013
296698
Alphaproteobacteria
CGC
Ala
>WENV170761125
LUMU01010158
176146
Alphaproteobacteria
CAT
Met
>WENV170760710
LUMU01000005
193463
Alphaproteobacteria
CCT
Arg
>WENV170760703
LUMU01000003
20437
Alphaproteobacteria
GGA
Ser
>WENV170760743
LUMU01000036
481802
Alphaproteobacteria
TCC
Gly
>WENV170761010
LUMU01003883
401037
Alphaproteobacteria
TTG
Gln
>WENV170760712
LUMU01000005
288727
Alphaproteobacteria
>WENV170760940
LUMU01001964
193088
Alphaproteobacteria
GAT
Ile
>WENV170760738
LUMU01000019
282977
Alphaproteobacteria
CAT
Met
>WENV170760708
LUMU01000005
192131
Alphaproteobacteria
GTC
Asp
>WENV170760717
LUMU01000005
184517
Alphaproteobacteria
GGG
Pro
>WENV170760706
LUMU01000005
176153
Alphaproteobacteria
CAT
Met
>WENV170760704
LUMU01000005
102146
Alphaproteobacteria
GTA
Tyr
>WENV170761251
LUMU01024551
73167
Alphaproteobacteria
GAG
Leu
>WENV170760742
LUMU01000036
400517
Alphaproteobacteria
GGT
Thr
>WENV170760728
LUMU01000010
282981
Alphaproteobacteria
CCA
Trp
>WENV170760744
LUMU01000037
480900
Alphaproteobacteria
GCA
Cys
>WENV170761024
LUMU01004594
398996
Alphaproteobacteria
GCC
Gly
>WENV170760726
LUMU01000007
118150
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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