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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170761361
LUMV01000053
193373
Alphaproteobacteria
CGG
Pro
>WENV170761415
LUMV01000281
193373
Alphaproteobacteria
CGG
Pro
>WENV170761485
LUMV01000570
193373
Alphaproteobacteria
CGG
Pro
>WENV170761587
LUMV01001968
296698
Alphaproteobacteria
CGC
Ala
>WENV170761406
LUMV01000228
481048
Alphaproteobacteria
GCA
Cys
>WENV170761389
LUMV01000182
289945
Alphaproteobacteria
TTC
Glu
>WENV170761523
LUMV01000887
193463
Alphaproteobacteria
CCT
Arg
>WENV170761493
LUMV01000623
20437
Alphaproteobacteria
GGA
Ser
>WENV170761451
LUMV01000430
481802
Alphaproteobacteria
TCC
Gly
>WENV170761475
LUMV01000539
481073
Alphaproteobacteria
CTG
Gln
>WENV170761660
LUMV01006130
400518
Alphaproteobacteria
GAA
Phe
>WENV170761365
LUMV01000060
398981
Alphaproteobacteria
GTT
Asn
>WENV170761370
LUMV01000086
288727
Alphaproteobacteria
>WENV170761449
LUMV01000413
288727
Alphaproteobacteria
>WENV170761705
LUMV01011210
193088
Alphaproteobacteria
GAT
Ile
>WENV170761484
LUMV01000570
178731
Alphaproteobacteria
GTC
Asp
>WENV170761445
LUMV01000404
400516
Alphaproteobacteria
TTG
Gln
>WENV170761433
LUMV01000353
282977
Alphaproteobacteria
CAT
Met
>WENV170761480
LUMV01000553
121250
Alphaproteobacteria
TAG
Leu
>WENV170761540
LUMV01001170
178733
Alphaproteobacteria
CAT
Met
>WENV170761489
LUMV01000592
192131
Alphaproteobacteria
GTC
Asp
>WENV170761559
LUMV01001468
184517
Alphaproteobacteria
GGG
Pro
>WENV170761393
LUMV01000185
22052
Alphaproteobacteria
GGA
Ser
>WENV170761497
LUMV01000635
176153
Alphaproteobacteria
CAT
Met
>WENV170761399
LUMV01000202
481074
Alphaproteobacteria
TCC
Gly
>WENV170761515
LUMV01000794
102146
Alphaproteobacteria
GTA
Tyr
>WENV170761369
LUMV01000078
102146
Alphaproteobacteria
GTA
Tyr
>WENV170761467
LUMV01000491
404744
Alphaproteobacteria
GCC
Gly
>WENV170761581
LUMV01001794
73167
Alphaproteobacteria
GAG
Leu
>WENV170761432
LUMV01000348
118247
Alphaproteobacteria
CAA
Leu
>WENV170761466
LUMV01000477
192275
Alphaproteobacteria
GTG
His
>WENV170761401
LUMV01000206
400419
Alphaproteobacteria
TTG
Gln
>WENV170761395
LUMV01000189
29655
Alphaproteobacteria
TGA
Ser
>WENV170761450
LUMV01000421
400517
Alphaproteobacteria
GGT
Thr
>WENV170761409
LUMV01000270
400517
Alphaproteobacteria
GGT
Thr
>WENV170761591
LUMV01002024
481098
Alphaproteobacteria
CTG
Gln
>WENV170761436
LUMV01000369
286018
Alphaproteobacteria
CCA
Trp
>WENV170761413
LUMV01000278
178736
Alphaproteobacteria
CCT
Arg
>WENV170761519
LUMV01000859
282981
Alphaproteobacteria
CCA
Trp
>WENV170761524
LUMV01000908
481099
Alphaproteobacteria
TCC
Gly
>WENV170761403
LUMV01000215
480900
Alphaproteobacteria
GCA
Cys
>WENV170761410
LUMV01000272
480900
Alphaproteobacteria
GCA
Cys
>WENV170761421
LUMV01000304
178576
Alphaproteobacteria
ACG
Arg
>WENV170761496
LUMV01000632
118150
Alphaproteobacteria
TAG
Leu
>WENV170761578
LUMV01001733
118150
Alphaproteobacteria
TAG
Leu
>WENV170761455
LUMV01000449
13340
Alphaproteobacteria
GCT
Ser
>WENV170761452
LUMV01000431
73523
Alphaproteobacteria
CAG
Leu
>WENV170761473
LUMV01000518
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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