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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170770635
LXNH01116207
158246
Gammaproteobacteria
GTC
Asp
>WENV170768393
LXNH01018563
480941
Gammaproteobacteria
TCC
Gly
>WENV170770503
LXNH01108441
480941
Gammaproteobacteria
TCC
Gly
>WENV170767388
LXNH01001113
292194
Gammaproteobacteria
GGT
Thr
>WENV170767454
LXNH01001735
292194
Gammaproteobacteria
GGT
Thr
>WENV170767490
LXNH01002012
292194
Gammaproteobacteria
GGT
Thr
>WENV170767930
LXNH01008170
292194
Gammaproteobacteria
GGT
Thr
>WENV170767938
LXNH01008360
282550
Gammaproteobacteria
TAC
Val
>WENV170769298
LXNH01049286
282550
Gammaproteobacteria
TAC
Val
>WENV170770157
LXNH01089598
190704
Gammaproteobacteria
GAT
Ile
>WENV170767265
LXNH01000254
351236
Gammaproteobacteria
TTT
Lys
>WENV170767281
LXNH01000331
351236
Gammaproteobacteria
TTT
Lys
>WENV170767535
LXNH01002580
351236
Gammaproteobacteria
TTT
Lys
>WENV170767612
LXNH01003535
351236
Gammaproteobacteria
TTT
Lys
>WENV170768869
LXNH01033125
351236
Gammaproteobacteria
TTT
Lys
>WENV170770028
LXNH01082040
351236
Gammaproteobacteria
TTT
Lys
>WENV170770150
LXNH01089057
292006
Gammaproteobacteria
TGC
Ala
>WENV170769803
LXNH01071062
292006
Gammaproteobacteria
TGC
Ala
>WENV170770536
LXNH01110285
243308
Gammaproteobacteria
TGG
Pro
>WENV170768431
LXNH01019505
243308
Gammaproteobacteria
TGG
Pro
>WENV170770178
LXNH01090439
281668
Gammaproteobacteria
TTT
Lys
>WENV170767519
LXNH01002357
281668
Gammaproteobacteria
TTT
Lys
>WENV170769761
LXNH01068854
281436
Gammaproteobacteria
TGC
Ala
>WENV170770158
LXNH01089598
281436
Gammaproteobacteria
TGC
Ala
>WENV170768944
LXNH01035952
176610
Gammaproteobacteria
ACG
Arg
>WENV170770625
LXNH01115434
176610
Gammaproteobacteria
ACG
Arg
>WENV170769760
LXNH01068854
176794
Gammaproteobacteria
GAT
Ile
>WENV170770585
LXNH01113597
242775
Gammaproteobacteria
TGG
Pro
>WENV170770149
LXNH01089057
176301
Gammaproteobacteria
GAT
Ile
>WENV170770010
LXNH01081227
176301
Gammaproteobacteria
GAT
Ile
>WENV170769802
LXNH01071062
176301
Gammaproteobacteria
GAT
Ile
>WENV170770299
LXNH01096858
282018
Gammaproteobacteria
TGT
Thr
>WENV170770036
LXNH01082450
282018
Gammaproteobacteria
TGT
Thr
>WENV170767978
LXNH01009300
282018
Gammaproteobacteria
TGT
Thr
>WENV170768351
LXNH01017510
281939
Gammaproteobacteria
TTT
Lys
>WENV170770627
LXNH01115604
179710
Gammaproteobacteria
GAC
Val
>WENV170769161
LXNH01044276
179710
Gammaproteobacteria
GAC
Val
>WENV170768874
LXNH01033253
179710
Gammaproteobacteria
GAC
Val
>WENV170768467
LXNH01020326
179710
Gammaproteobacteria
GAC
Val
>WENV170769010
LXNH01038514
186591
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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