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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170779556
LZQQ01000002
176243
Gammaproteobacteria
CCG
Arg
>WENV170779560
LZQQ01000009
184276
Gammaproteobacteria
ACG
Arg
>WENV170779561
LZQQ01000009
184276
Gammaproteobacteria
ACG
Arg
>WENV170779564
LZQQ01000010
280882
Gammaproteobacteria
GTG
His
>WENV170779566
LZQQ01000012
401696
Gammaproteobacteria
TTG
Gln
>WENV170779567
LZQQ01000012
179613
Gammaproteobacteria
CAT
Met
>WENV170779570
LZQQ01000019
289658
Gammaproteobacteria
CGT
Thr
>WENV170779586
LZQQ01000070
316551
Gammaproteobacteria
GTT
Asn
>WENV170779588
LZQQ01000073
200456
Gammaproteobacteria
ACG
Arg
>WENV170779590
LZQQ01000090
317782
Gammaproteobacteria
TAC
Val
>WENV170779596
LZQQ01000142
176301
Gammaproteobacteria
GAT
Ile
>WENV170779606
LZQQ01000194
30597
Gammaproteobacteria
TGA
Ser
>WENV170779608
LZQQ01000225
30597
Gammaproteobacteria
TGA
Ser
>WENV170779613
LZQQ01000322
31324
Gammaproteobacteria
GGA
Ser
>WENV170779615
LZQQ01000330
180718
Gammaproteobacteria
CAT
Met
>WENV170779623
LZQQ01000418
178025
Gammaproteobacteria
GAC
Val
>WENV170779626
LZQQ01000450
73687
Gammaproteobacteria
TAA
Leu
>WENV170779625
LZQQ01000450
490297
Gammaproteobacteria
GCA
Cys
>WENV170779629
LZQQ01000501
281668
Gammaproteobacteria
TTT
Lys
>WENV170779635
LZQQ01000587
312832
Gammaproteobacteria
TGT
Thr
>WENV170779642
LZQQ01000776
176242
Gammaproteobacteria
CCG
Arg
>WENV170779645
LZQQ01000816
307199
Gammaproteobacteria
GTG
His
>WENV170779651
LZQQ01000939
199910
Gammaproteobacteria
CAT
Met
>WENV170779655
LZQQ01000980
280876
Gammaproteobacteria
GGT
Thr
>WENV170779653
LZQQ01000980
117821
Gammaproteobacteria
GTA
Tyr
>WENV170779658
LZQQ01001052
303413
Gammaproteobacteria
GGT
Thr
>WENV170779656
LZQQ01001052
117821
Gammaproteobacteria
GTA
Tyr
>WENV170779659
LZQQ01001074
292006
Gammaproteobacteria
TGC
Ala
>WENV170779662
LZQQ01001134
176478
Gammaproteobacteria
CAT
Met
>WENV170779669
LZQQ01001693
401696
Gammaproteobacteria
TTG
Gln
>WENV170779672
LZQQ01001731
280882
Gammaproteobacteria
GTG
His
>WENV170779681
LZQQ01002406
422716
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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