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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170779824
LZQR01001331
29627
Alphaproteobacteria
GGA
Ser
>WENV170779793
LZQR01000873
180022
Alphaproteobacteria
ACG
Arg
>WENV170779776
LZQR01000559
236192
Alphaproteobacteria
GTG
His
>WENV170779772
LZQR01000417
178815
Alphaproteobacteria
GGG
Pro
>WENV170779785
LZQR01000617
283596
Alphaproteobacteria
TTC
Glu
>WENV170779784
LZQR01000604
368481
Alphaproteobacteria
TGC
Ala
>WENV170779792
LZQR01000865
198858
Alphaproteobacteria
CAT
Met
>WENV170779854
LZQR01002570
400544
Alphaproteobacteria
GGT
Thr
>WENV170779790
LZQR01000820
419842
Alphaproteobacteria
GCC
Gly
>WENV170779783
LZQR01000604
234327
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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