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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170779827
LZQR01001402
176172
Gammaproteobacteria
>WENV170779829
LZQR01001402
176172
Gammaproteobacteria
>WENV170779712
LZQR01000038
200456
Gammaproteobacteria
ACG
Arg
>WENV170779714
LZQR01000041
25129
Gammaproteobacteria
TGA
Ser
>WENV170779787
LZQR01000691
25129
Gammaproteobacteria
TGA
Ser
>WENV170779789
LZQR01000799
25129
Gammaproteobacteria
TGA
Ser
>WENV170779834
LZQR01001431
25129
Gammaproteobacteria
TGA
Ser
>WENV170779849
LZQR01002333
280810
Gammaproteobacteria
GTG
His
>WENV170779746
LZQR01000183
176170
Gammaproteobacteria
GAC
Val
>WENV170779801
LZQR01000972
280808
Gammaproteobacteria
>WENV170779821
LZQR01001287
280808
Gammaproteobacteria
>WENV170779843
LZQR01001863
280808
Gammaproteobacteria
>WENV170779774
LZQR01000451
176173
Gammaproteobacteria
>WENV170779715
LZQR01000042
316551
Gammaproteobacteria
GTT
Asn
>WENV170779808
LZQR01000986
280672
Gammaproteobacteria
GGT
Thr
>WENV170779802
LZQR01000972
176169
Gammaproteobacteria
>WENV170779863
LZQR01004059
134404
Gammaproteobacteria
TAG
Leu
>WENV170779865
LZQR01004059
134404
Gammaproteobacteria
TAG
Leu
>WENV170779867
LZQR01004059
134404
Gammaproteobacteria
TAG
Leu
>WENV170779869
LZQR01004059
134404
Gammaproteobacteria
TAG
Leu
>WENV170779855
LZQR01002653
56104
Gammaproteobacteria
GGA
Ser
>WENV170779750
LZQR01000222
218745
Gammaproteobacteria
CCA
Trp
>WENV170779818
LZQR01001270
335369
Gammaproteobacteria
GTC
Asp
>WENV170779852
LZQR01002520
117798
Gammaproteobacteria
CAA
Leu
>WENV170779729
LZQR01000107
281668
Gammaproteobacteria
TTT
Lys
>WENV170779777
LZQR01000565
280812
Gammaproteobacteria
GAA
Phe
>WENV170779803
LZQR01000986
280812
Gammaproteobacteria
GAA
Phe
>WENV170779749
LZQR01000206
143504
Gammaproteobacteria
GAG
Leu
>WENV170779825
LZQR01001350
143504
Gammaproteobacteria
GAG
Leu
>WENV170779744
LZQR01000179
343176
Gammaproteobacteria
TAC
Val
>WENV170779835
LZQR01001470
343176
Gammaproteobacteria
TAC
Val
>WENV170779767
LZQR01000367
199910
Gammaproteobacteria
CAT
Met
>WENV170779775
LZQR01000550
176175
Gammaproteobacteria
CCT
Arg
>WENV170779828
LZQR01001402
13231
Gammaproteobacteria
GCT
Ser
>WENV170779778
LZQR01000567
102517
Gammaproteobacteria
GTA
Tyr
>WENV170779779
LZQR01000567
102517
Gammaproteobacteria
GTA
Tyr
>WENV170779832
LZQR01001419
370865
Gammaproteobacteria
TAC
Val
>WENV170779839
LZQR01001647
209813
Gammaproteobacteria
GAT
Ile
>WENV170779687
LZQR01000002
176301
Gammaproteobacteria
GAT
Ile
>WENV170779769
LZQR01000401
490297
Gammaproteobacteria
GCA
Cys
>WENV170779813
LZQR01001077
176168
Gammaproteobacteria
TCT
Arg
>WENV170779800
LZQR01000972
238652
Gammaproteobacteria
CAT
Met
>WENV170779826
LZQR01001350
238652
Gammaproteobacteria
CAT
Met
>WENV170779805
LZQR01000986
280814
Gammaproteobacteria
GTT
Asn
>WENV170779807
LZQR01000986
280814
Gammaproteobacteria
GTT
Asn
>WENV170779848
LZQR01002333
176171
Gammaproteobacteria
CCG
Arg
>WENV170779742
LZQR01000178
307199
Gammaproteobacteria
GTG
His
>WENV170779820
LZQR01001287
73055
Gammaproteobacteria
TAA
Leu
>WENV170779823
LZQR01001287
73055
Gammaproteobacteria
TAA
Leu
>WENV170779842
LZQR01001863
73055
Gammaproteobacteria
TAA
Leu
>WENV170779864
LZQR01004059
466620
Gammaproteobacteria
TTG
Gln
>WENV170779868
LZQR01004059
466620
Gammaproteobacteria
TTG
Gln
>WENV170779728
LZQR01000103
480397
Gammaproteobacteria
GCA
Cys
>WENV170779811
LZQR01001052
480397
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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