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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170779888
MAAA01000714
176301
Gammaproteobacteria
GAT
Ile
>WENV170779896
MAAA01000877
296670
Gammaproteobacteria
TGT
Thr
>WENV170779904
MAAA01001284
296670
Gammaproteobacteria
TGT
Thr
>WENV170779923
MAAA01003046
296670
Gammaproteobacteria
TGT
Thr
>WENV170779961
MAAA01004417
296670
Gammaproteobacteria
TGT
Thr
>WENV170779978
MAAA01005172
176301
Gammaproteobacteria
GAT
Ile
>WENV170779979
MAAA01005172
281418
Gammaproteobacteria
TGC
Ala
>WENV170779991
MAAA01007120
176301
Gammaproteobacteria
GAT
Ile
>WENV170779992
MAAA01007120
281418
Gammaproteobacteria
TGC
Ala
>WENV170780012
MAAA01008515
141076
Gammaproteobacteria
GTA
Tyr
>WENV170780019
MAAA01008958
296670
Gammaproteobacteria
TGT
Thr
>WENV170780023
MAAA01009312
350703
Gammaproteobacteria
TTT
Lys
>WENV170780050
MAAA01010848
296670
Gammaproteobacteria
TGT
Thr
>WENV170780061
MAAA01011231
296670
Gammaproteobacteria
TGT
Thr
>WENV170780072
MAAA01012609
296670
Gammaproteobacteria
TGT
Thr
>WENV170780107
MAAA01014482
296670
Gammaproteobacteria
TGT
Thr
>WENV170780108
MAAA01014482
296670
Gammaproteobacteria
TGT
Thr
>WENV170780153
MAAA01017629
296670
Gammaproteobacteria
TGT
Thr
>WENV170780189
MAAA01019425
226555
Gammaproteobacteria
GTC
Asp
>WENV170780213
MAAA01021541
226555
Gammaproteobacteria
GTC
Asp
>WENV170780215
MAAA01021541
226555
Gammaproteobacteria
GTC
Asp
>WENV170780216
MAAA01021541
226555
Gammaproteobacteria
GTC
Asp
>WENV170780218
MAAA01021721
350703
Gammaproteobacteria
TTT
Lys
>WENV170780219
MAAA01021722
350703
Gammaproteobacteria
TTT
Lys
>WENV170780227
MAAA01022325
141076
Gammaproteobacteria
GTA
Tyr
>WENV170780253
MAAA01024568
141076
Gammaproteobacteria
GTA
Tyr
>WENV170780266
MAAA01025652
451238
Gammaproteobacteria
GCC
Gly
>WENV170780275
MAAA01026158
451238
Gammaproteobacteria
GCC
Gly
>WENV170780277
MAAA01026158
451238
Gammaproteobacteria
GCC
Gly
>WENV170780278
MAAA01026158
451238
Gammaproteobacteria
GCC
Gly
>WENV170780281
MAAA01026660
451238
Gammaproteobacteria
GCC
Gly
>WENV170780284
MAAA01026774
296670
Gammaproteobacteria
TGT
Thr
>WENV170780287
MAAA01027462
226555
Gammaproteobacteria
GTC
Asp
>WENV170780325
MAAA01028477
118078
Gammaproteobacteria
GTA
Tyr
>WENV170780329
MAAA01028700
282683
Gammaproteobacteria
GGC
Ala
>WENV170780330
MAAA01028700
282684
Gammaproteobacteria
TTC
Glu
>WENV170780331
MAAA01028787
282687
Gammaproteobacteria
GCC
Gly
>WENV170780333
MAAA01028787
118082
Gammaproteobacteria
TAA
Leu
>WENV170780336
MAAA01029006
178004
Gammaproteobacteria
CCA
Trp
>WENV170780337
MAAA01029067
335190
Gammaproteobacteria
TTT
Lys
>WENV170780338
MAAA01029100
180717
Gammaproteobacteria
CCA
Trp
>WENV170780340
MAAA01029165
178009
Gammaproteobacteria
TGG
Pro
>WENV170780345
MAAA01029571
362004
Gammaproteobacteria
TGT
Thr
>WENV170780346
MAAA01029571
118078
Gammaproteobacteria
GTA
Tyr
>WENV170780349
MAAA01029954
296670
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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