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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
99 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170783703
MAAC01018389
398995
Alphaproteobacteria
CAC
Val
>WENV170783005
MAAC01012751
190614
Alphaproteobacteria
TGG
Pro
>WENV170783576
MAAC01017969
111261
Alphaproteobacteria
GTA
Tyr
>WENV170782290
MAAC01009671
186414
Alphaproteobacteria
CAT
Met
>WENV170782386
MAAC01009744
446430
Alphaproteobacteria
CAC
Val
>WENV170783878
MAAC01019348
400930
Alphaproteobacteria
GAA
Phe
>WENV170781811
MAAC01000789
178062
Alphaproteobacteria
CAT
Met
>WENV170781943
MAAC01004901
178062
Alphaproteobacteria
CAT
Met
>WENV170782077
MAAC01008017
178062
Alphaproteobacteria
CAT
Met
>WENV170782104
MAAC01008458
178062
Alphaproteobacteria
CAT
Met
>WENV170782128
MAAC01009381
178062
Alphaproteobacteria
CAT
Met
>WENV170782636
MAAC01011018
178062
Alphaproteobacteria
CAT
Met
>WENV170782037
MAAC01006664
29841
Alphaproteobacteria
GGA
Ser
>WENV170783729
MAAC01018442
29841
Alphaproteobacteria
GGA
Ser
>WENV170782401
MAAC01009746
140876
Alphaproteobacteria
>WENV170783000
MAAC01012706
140876
Alphaproteobacteria
>WENV170783739
MAAC01018473
140876
Alphaproteobacteria
>WENV170783884
MAAC01019361
140876
Alphaproteobacteria
>WENV170783719
MAAC01018415
179390
Alphaproteobacteria
TGG
Pro
>WENV170782356
MAAC01009716
315952
Alphaproteobacteria
GAA
Phe
>WENV170783894
MAAC01019413
181926
Alphaproteobacteria
ACG
Arg
>WENV170782999
MAAC01012691
140893
Alphaproteobacteria
CAA
Leu
>WENV170782385
MAAC01009744
140893
Alphaproteobacteria
CAA
Leu
>WENV170781879
MAAC01003187
140893
Alphaproteobacteria
CAA
Leu
>WENV170781857
MAAC01002574
191064
Alphaproteobacteria
CCG
Arg
>WENV170782996
MAAC01012676
100185
Alphaproteobacteria
GAG
Leu
>WENV170782294
MAAC01009671
73490
Alphaproteobacteria
GAG
Leu
>WENV170782371
MAAC01009734
73490
Alphaproteobacteria
GAG
Leu
>WENV170782382
MAAC01009744
73490
Alphaproteobacteria
GAG
Leu
>WENV170783034
MAAC01013214
73490
Alphaproteobacteria
GAG
Leu
>WENV170782326
MAAC01009691
487436
Alphaproteobacteria
TCC
Gly
>WENV170783718
MAAC01018414
487436
Alphaproteobacteria
TCC
Gly
>WENV170783019
MAAC01012938
400384
Alphaproteobacteria
TTC
Glu
>WENV170783020
MAAC01012938
400384
Alphaproteobacteria
TTC
Glu
>WENV170782415
MAAC01009752
400514
Alphaproteobacteria
TTG
Gln
>WENV170783006
MAAC01012762
400514
Alphaproteobacteria
TTG
Gln
>WENV170781909
MAAC01004227
180029
Alphaproteobacteria
CAT
Met
>WENV170782411
MAAC01009746
180029
Alphaproteobacteria
CAT
Met
>WENV170783027
MAAC01013091
180029
Alphaproteobacteria
CAT
Met
>WENV170783041
MAAC01013286
405688
Alphaproteobacteria
GTT
Asn
>WENV170783704
MAAC01018396
179941
Alphaproteobacteria
CAT
Met
>WENV170783879
MAAC01019349
140892
Alphaproteobacteria
TAG
Leu
>WENV170782988
MAAC01012579
140892
Alphaproteobacteria
TAG
Leu
>WENV170782084
MAAC01008156
178509
Alphaproteobacteria
CCT
Arg
>WENV170782097
MAAC01008296
29729
Alphaproteobacteria
GCT
Ser
>WENV170782391
MAAC01009744
29729
Alphaproteobacteria
GCT
Ser
>WENV170783892
MAAC01019410
29729
Alphaproteobacteria
GCT
Ser
>WENV170783728
MAAC01018441
179388
Alphaproteobacteria
GTG
His
>WENV170782418
MAAC01009759
320046
Alphaproteobacteria
CGT
Thr
>WENV170781839
MAAC01001860
176234
Alphaproteobacteria
CCT
Arg
>WENV170781910
MAAC01004239
176234
Alphaproteobacteria
CCT
Arg
>WENV170781936
MAAC01004759
176234
Alphaproteobacteria
CCT
Arg
>WENV170782390
MAAC01009744
398999
Alphaproteobacteria
GGT
Thr
>WENV170782328
MAAC01009695
100184
Alphaproteobacteria
CAG
Leu
>WENV170782399
MAAC01009746
178503
Alphaproteobacteria
GGG
Pro
>WENV170783008
MAAC01012791
178503
Alphaproteobacteria
GGG
Pro
>WENV170783032
MAAC01013192
178503
Alphaproteobacteria
GGG
Pro
>WENV170782986
MAAC01012569
29727
Alphaproteobacteria
CGA
Ser
>WENV170783744
MAAC01018491
29727
Alphaproteobacteria
CGA
Ser
>WENV170782993
MAAC01012631
283510
Alphaproteobacteria
TTT
Lys
>WENV170783025
MAAC01013017
76223
Alphaproteobacteria
CAG
Leu
>WENV170783886
MAAC01019382
76223
Alphaproteobacteria
CAG
Leu
>WENV170783717
MAAC01018413
156125
Alphaproteobacteria
TCT
Arg
>WENV170783898
MAAC01019428
281650
Alphaproteobacteria
CCA
Trp
>WENV170783004
MAAC01012746
281650
Alphaproteobacteria
CCA
Trp
>WENV170782021
MAAC01006462
481326
Alphaproteobacteria
GCA
Cys
>WENV170783033
MAAC01013213
481326
Alphaproteobacteria
GCA
Cys
>WENV170783874
MAAC01019328
215287
Alphaproteobacteria
GGG
Pro
>WENV170783715
MAAC01018412
215287
Alphaproteobacteria
GGG
Pro
>WENV170782393
MAAC01009745
178728
Alphaproteobacteria
CGG
Pro
>WENV170782380
MAAC01009744
432650
Alphaproteobacteria
GAA
Phe
>WENV170782028
MAAC01006608
432650
Alphaproteobacteria
GAA
Phe
>WENV170781810
MAAC01000755
432650
Alphaproteobacteria
GAA
Phe
>WENV170782987
MAAC01012573
432650
Alphaproteobacteria
GAA
Phe
>WENV170783044
MAAC01013308
432650
Alphaproteobacteria
GAA
Phe
>WENV170783735
MAAC01018449
432650
Alphaproteobacteria
GAA
Phe
>WENV170783013
MAAC01012851
400515
Alphaproteobacteria
GAC
Val
>WENV170782414
MAAC01009748
400515
Alphaproteobacteria
GAC
Val
>WENV170782412
MAAC01009746
398994
Alphaproteobacteria
GTT
Asn
>WENV170783726
MAAC01018433
398994
Alphaproteobacteria
GTT
Asn
>WENV170783864
MAAC01019248
398994
Alphaproteobacteria
GTT
Asn
>WENV170782395
MAAC01009745
283556
Alphaproteobacteria
TTT
Lys
>WENV170782402
MAAC01009746
399000
Alphaproteobacteria
TTC
Glu
>WENV170782991
MAAC01012619
399000
Alphaproteobacteria
TTC
Glu
>WENV170782992
MAAC01012627
399000
Alphaproteobacteria
TTC
Glu
>WENV170782629
MAAC01010875
281676
Alphaproteobacteria
TAC
Val
>WENV170782998
MAAC01012678
281676
Alphaproteobacteria
TAC
Val
>WENV170783745
MAAC01018493
281676
Alphaproteobacteria
TAC
Val
>WENV170783883
MAAC01019361
281676
Alphaproteobacteria
TAC
Val
>WENV170782994
MAAC01012641
481096
Alphaproteobacteria
CCC
Gly
>WENV170782990
MAAC01012597
481096
Alphaproteobacteria
CCC
Gly
>WENV170782127
MAAC01009379
481096
Alphaproteobacteria
CCC
Gly
>WENV170782403
MAAC01009746
179724
Alphaproteobacteria
ACG
Arg
>WENV170783588
MAAC01018023
296763
Alphaproteobacteria
CCA
Trp
>WENV170782361
MAAC01009725
296763
Alphaproteobacteria
CCA
Trp
>WENV170782383
MAAC01009744
121990
Alphaproteobacteria
TAG
Leu
>WENV170782400
MAAC01009746
398996
Alphaproteobacteria
GCC
Gly
>WENV170782997
MAAC01012676
398996
Alphaproteobacteria
GCC
Gly
>WENV170783888
MAAC01019385
179638
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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