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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784518
MCNE01000019
73113
Gammaproteobacteria
TAA
Leu
>WENV170784530
MCNE01000072
176628
Gammaproteobacteria
GGG
Pro
>WENV170784535
MCNE01000133
281229
Gammaproteobacteria
GTT
Asn
>WENV170784556
MCNE01000691
319467
Gammaproteobacteria
TGT
Thr
>WENV170784531
MCNE01000088
29449
Gammaproteobacteria
CGA
Ser
>WENV170784532
MCNE01000111
176631
Gammaproteobacteria
CCT
Arg
>WENV170784593
MCNE01003321
9062
Gammaproteobacteria
GCT
Ser
>WENV170784511
MCNE01000003
176627
Gammaproteobacteria
CCG
Arg
>WENV170784512
MCNE01000006
480506
Gammaproteobacteria
CCC
Gly
>WENV170784520
MCNE01000028
283441
Gammaproteobacteria
>WENV170784545
MCNE01000228
56419
Gammaproteobacteria
TGA
Ser
>WENV170784526
MCNE01000047
117879
Gammaproteobacteria
TAG
Leu
>WENV170784592
MCNE01003081
480368
Gammaproteobacteria
CCC
Gly
>WENV170784588
MCNE01002693
328876
Gammaproteobacteria
CTT
Lys
>WENV170784527
MCNE01000071
231805
Gammaproteobacteria
CAT
Met
>WENV170784509
MCNE01000001
117930
Gammaproteobacteria
CAA
Leu
>WENV170784581
MCNE01001718
284316
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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