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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170815454
MDSX01010482
408543
Alphaproteobacteria
GAC
Val
>WENV170816234
MDSX01026517
428327
Alphaproteobacteria
GCC
Gly
>WENV170816244
MDSX01026814
184691
Alphaproteobacteria
GTG
His
>WENV170816274
MDSX01027547
400384
Alphaproteobacteria
TTC
Glu
>WENV170816506
MDSX01031429
179639
Alphaproteobacteria
ACG
Arg
>WENV170816723
MDSX01035566
428327
Alphaproteobacteria
GCC
Gly
>WENV170816724
MDSX01035598
197241
Alphaproteobacteria
GGG
Pro
>WENV170817003
MDSX01041903
179941
Alphaproteobacteria
CAT
Met
>WENV170817045
MDSX01042800
400384
Alphaproteobacteria
TTC
Glu
>WENV170817077
MDSX01043411
296763
Alphaproteobacteria
CCA
Trp
>WENV170817418
MDSX01049954
190609
Alphaproteobacteria
TCT
Arg
>WENV170817479
MDSX01051173
281650
Alphaproteobacteria
CCA
Trp
>WENV170817700
MDSX01055438
121990
Alphaproteobacteria
TAG
Leu
>WENV170818103
MDSX01063584
405688
Alphaproteobacteria
GTT
Asn
>WENV170818177
MDSX01065094
77412
Alphaproteobacteria
CAG
Leu
>WENV170818442
MDSX01071666
29702
Alphaproteobacteria
GGA
Ser
>WENV170818474
MDSX01072413
481326
Alphaproteobacteria
GCA
Cys
>WENV170818558
MDSX01074283
314617
Alphaproteobacteria
TAC
Val
>WENV170818930
MDSX01082235
398994
Alphaproteobacteria
GTT
Asn
>WENV170818945
MDSX01082488
281650
Alphaproteobacteria
CCA
Trp
>WENV170819143
MDSX01086591
481268
Alphaproteobacteria
TCC
Gly
>WENV170819157
MDSX01087057
296763
Alphaproteobacteria
CCA
Trp
>WENV170819190
MDSX01087820
179639
Alphaproteobacteria
ACG
Arg
>WENV170819278
MDSX01089635
178725
Alphaproteobacteria
GTG
His
>WENV170819303
MDSX01090088
179639
Alphaproteobacteria
ACG
Arg
>WENV170819346
MDSX01091000
100184
Alphaproteobacteria
CAG
Leu
>WENV170819420
MDSX01092147
121990
Alphaproteobacteria
TAG
Leu
>WENV170819520
MDSX01094218
432650
Alphaproteobacteria
GAA
Phe
>WENV170820091
MDSX01105670
481268
Alphaproteobacteria
TCC
Gly
>WENV170820095
MDSX01105735
428327
Alphaproteobacteria
GCC
Gly
>WENV170820099
MDSX01105780
178784
Alphaproteobacteria
CAT
Met
>WENV170820107
MDSX01106072
481268
Alphaproteobacteria
TCC
Gly
>WENV170820118
MDSX01106298
140876
Alphaproteobacteria
>WENV170820133
MDSX01106826
398994
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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