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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170816378
MDSX01029575
284706
Gammaproteobacteria
GTT
Asn
>WENV170819010
MDSX01083698
158246
Gammaproteobacteria
GTC
Asp
>WENV170815857
MDSX01018225
226555
Gammaproteobacteria
GTC
Asp
>WENV170817387
MDSX01049277
226555
Gammaproteobacteria
GTC
Asp
>WENV170815035
MDSX01003399
297858
Gammaproteobacteria
TGC
Ala
>WENV170818787
MDSX01079022
209464
Gammaproteobacteria
CCG
Arg
>WENV170819996
MDSX01103704
20664
Gammaproteobacteria
GCT
Ser
>WENV170815817
MDSX01017345
422716
Gammaproteobacteria
TTG
Gln
>WENV170818308
MDSX01068415
314350
Gammaproteobacteria
CCA
Trp
>WENV170818761
MDSX01078412
176796
Gammaproteobacteria
GGG
Pro
>WENV170817256
MDSX01046761
284022
Gammaproteobacteria
TGT
Thr
>WENV170817552
MDSX01052830
121740
Gammaproteobacteria
TAG
Leu
>WENV170817551
MDSX01052830
178472
Gammaproteobacteria
CAT
Met
>WENV170818608
MDSX01075199
73501
Gammaproteobacteria
GAG
Leu
>WENV170817528
MDSX01052424
140925
Gammaproteobacteria
GTA
Tyr
>WENV170818894
MDSX01081580
329164
Gammaproteobacteria
TTT
Lys
>WENV170819997
MDSX01103704
221668
Gammaproteobacteria
ACG
Arg
>WENV170815196
MDSX01006046
221668
Gammaproteobacteria
ACG
Arg
>WENV170815195
MDSX01006046
221668
Gammaproteobacteria
ACG
Arg
>WENV170818908
MDSX01081957
176169
Gammaproteobacteria
>WENV170816162
MDSX01024901
178471
Gammaproteobacteria
GTT
Asn
>WENV170816163
MDSX01024901
178471
Gammaproteobacteria
GTT
Asn
>WENV170817639
MDSX01054373
313852
Gammaproteobacteria
TTC
Glu
>WENV170817635
MDSX01054373
313852
Gammaproteobacteria
TTC
Glu
>WENV170817633
MDSX01054373
313852
Gammaproteobacteria
TTC
Glu
>WENV170815804
MDSX01016975
317782
Gammaproteobacteria
TAC
Val
>WENV170819379
MDSX01091358
317782
Gammaproteobacteria
TAC
Val
>WENV170819381
MDSX01091358
317782
Gammaproteobacteria
TAC
Val
>WENV170819383
MDSX01091358
317782
Gammaproteobacteria
TAC
Val
>WENV170818549
MDSX01074025
73498
Gammaproteobacteria
CAA
Leu
>WENV170818864
MDSX01081005
181513
Gammaproteobacteria
TGG
Pro
>WENV170817725
MDSX01055937
181513
Gammaproteobacteria
TGG
Pro
>WENV170816329
MDSX01028704
402281
Gammaproteobacteria
GCC
Gly
>WENV170816526
MDSX01031963
178466
Gammaproteobacteria
CCA
Trp
>WENV170816588
MDSX01032969
291402
Gammaproteobacteria
GTG
His
>WENV170815089
MDSX01004691
291402
Gammaproteobacteria
GTG
His
>WENV170817529
MDSX01052424
481325
Gammaproteobacteria
TCC
Gly
>WENV170817831
MDSX01057689
118413
Gammaproteobacteria
TAG
Leu
>WENV170817689
MDSX01055226
178169
Gammaproteobacteria
GAC
Val
>WENV170816731
MDSX01035842
208229
Gammaproteobacteria
TGG
Pro
>WENV170817218
MDSX01045951
74048
Gammaproteobacteria
CAA
Leu
>WENV170816092
MDSX01023542
302111
Gammaproteobacteria
GTT
Asn
>WENV170819281
MDSX01089668
334421
Gammaproteobacteria
TGT
Thr
>WENV170816084
MDSX01023454
334421
Gammaproteobacteria
TGT
Thr
>WENV170817553
MDSX01052830
411344
Gammaproteobacteria
TTG
Gln
>WENV170817411
MDSX01049811
176544
Gammaproteobacteria
CAT
Met
>WENV170817562
MDSX01052934
186418
Gammaproteobacteria
GTC
Asp
>WENV170817241
MDSX01046486
73504
Gammaproteobacteria
TAA
Leu
>WENV170817422
MDSX01050000
180680
Gammaproteobacteria
GAC
Val
>WENV170816608
MDSX01033483
296672
Gammaproteobacteria
GGT
Thr
>WENV170819247
MDSX01088900
180678
Gammaproteobacteria
CCG
Arg
>WENV170815558
MDSX01012323
285547
Gammaproteobacteria
TTG
Gln
>WENV170818973
MDSX01083135
180681
Gammaproteobacteria
TGG
Pro
>WENV170815295
MDSX01007712
180681
Gammaproteobacteria
TGG
Pro
>WENV170819505
MDSX01093765
8667
Gammaproteobacteria
GCT
Ser
>WENV170816261
MDSX01027271
218791
Gammaproteobacteria
ACG
Arg
>WENV170815621
MDSX01013473
282018
Gammaproteobacteria
TGT
Thr
>WENV170816569
MDSX01032652
282018
Gammaproteobacteria
TGT
Thr
>WENV170816070
MDSX01023304
315775
Gammaproteobacteria
TGT
Thr
>WENV170816297
MDSX01028027
315775
Gammaproteobacteria
TGT
Thr
>WENV170818437
MDSX01071506
198943
Gammaproteobacteria
CAT
Met
>WENV170815449
MDSX01010362
198943
Gammaproteobacteria
CAT
Met
>WENV170818448
MDSX01071811
300318
Gammaproteobacteria
GGC
Ala
>WENV170816808
MDSX01037668
179710
Gammaproteobacteria
GAC
Val
>WENV170816243
MDSX01026803
179710
Gammaproteobacteria
GAC
Val
>WENV170817412
MDSX01049811
118640
Gammaproteobacteria
TAG
Leu
>WENV170815420
MDSX01009789
81474
Gammaproteobacteria
CAG
Leu
>WENV170816606
MDSX01033483
141076
Gammaproteobacteria
GTA
Tyr
>WENV170816533
MDSX01032022
186591
Gammaproteobacteria
ACG
Arg
>WENV170817002
MDSX01041808
216016
Gammaproteobacteria
CAT
Met
>WENV170817688
MDSX01055226
179189
Gammaproteobacteria
CAT
Met
>WENV170817193
MDSX01045324
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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