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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170838659
MDSZ01171926
285019
Betaproteobacteria
CCT
Arg
>WENV170830255
MDSZ01023721
22369
Betaproteobacteria
GGA
Ser
>WENV170843561
MDSZ01262559
281524
Betaproteobacteria
GAA
Phe
>WENV170835042
MDSZ01106851
194297
Betaproteobacteria
TTG
Gln
>WENV170842264
MDSZ01237074
179360
Betaproteobacteria
TTG
Gln
>WENV170830017
MDSZ01019354
117806
Betaproteobacteria
GTA
Tyr
>WENV170843099
MDSZ01254091
286629
Betaproteobacteria
CCA
Trp
>WENV170842377
MDSZ01239275
286629
Betaproteobacteria
CCA
Trp
>WENV170836646
MDSZ01135173
292271
Betaproteobacteria
TGT
Thr
>WENV170838656
MDSZ01171926
118799
Betaproteobacteria
GAG
Leu
>WENV170833127
MDSZ01074444
118799
Betaproteobacteria
GAG
Leu
>WENV170843175
MDSZ01255494
180114
Betaproteobacteria
CAT
Met
>WENV170829868
MDSZ01016108
225043
Betaproteobacteria
ACG
Arg
>WENV170842268
MDSZ01237074
186768
Betaproteobacteria
>WENV170842267
MDSZ01237074
186768
Betaproteobacteria
>WENV170834221
MDSZ01093943
186768
Betaproteobacteria
>WENV170834220
MDSZ01093943
186768
Betaproteobacteria
>WENV170840725
MDSZ01209831
5756
Betaproteobacteria
GCT
Ser
>WENV170840346
MDSZ01202839
193851
Betaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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