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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170845891
MDTA01032489
400818
Bacteroidota
TTC
Glu
>WENV170849893
MDTA01104285
400818
Bacteroidota
TTC
Glu
>WENV170845621
MDTA01027360
281538
Bacteroidota
GAA
Phe
>WENV170845573
MDTA01026422
156605
Bacteroidota
GAC
Val
>WENV170846637
MDTA01046059
156605
Bacteroidota
GAC
Val
>WENV170849440
MDTA01095838
281336
Bacteroidota
TCC
Gly
>WENV170850422
MDTA01113785
305664
Bacteroidota
CAT
Met
>WENV170851009
MDTA01124722
320669
Bacteroidota
GAA
Phe
>WENV170849840
MDTA01103159
320669
Bacteroidota
GAA
Phe
>WENV170845274
MDTA01020841
320669
Bacteroidota
GAA
Phe
>WENV170852267
MDTA01147042
336507
Bacteroidota
TCC
Gly
>WENV170852817
MDTA01157877
336507
Bacteroidota
TCC
Gly
>WENV170854346
MDTA01187273
336507
Bacteroidota
TCC
Gly
>WENV170846735
MDTA01047692
155808
Bacteroidota
TGG
Pro
>WENV170848511
MDTA01080452
155808
Bacteroidota
TGG
Pro
>WENV170850090
MDTA01107665
155808
Bacteroidota
TGG
Pro
>WENV170851671
MDTA01135880
155808
Bacteroidota
TGG
Pro
>WENV170852863
MDTA01158639
155808
Bacteroidota
TGG
Pro
>WENV170853136
MDTA01163438
155808
Bacteroidota
TGG
Pro
>WENV170854971
MDTA01198250
155808
Bacteroidota
TGG
Pro
>WENV170853627
MDTA01173397
155808
Bacteroidota
TGG
Pro
>WENV170851672
MDTA01135880
176812
Bacteroidota
TCT
Arg
>WENV170851389
MDTA01131253
176812
Bacteroidota
TCT
Arg
>WENV170850484
MDTA01114966
176812
Bacteroidota
TCT
Arg
>WENV170845162
MDTA01018964
176812
Bacteroidota
TCT
Arg
>WENV170856701
MDTA01228400
291910
Bacteroidota
TTG
Gln
>WENV170850257
MDTA01111036
121312
Bacteroidota
TAG
Leu
>WENV170849697
MDTA01100570
121312
Bacteroidota
TAG
Leu
>WENV170851340
MDTA01130357
179905
Bacteroidota
GTT
Asn
>WENV170852321
MDTA01148116
227539
Bacteroidota
GTT
Asn
>WENV170852809
MDTA01157675
227539
Bacteroidota
GTT
Asn
>WENV170852373
MDTA01149076
286857
Bacteroidota
TTT
Lys
>WENV170845779
MDTA01030405
286857
Bacteroidota
TTT
Lys
>WENV170853436
MDTA01169738
193718
Bacteroidota
GTC
Asp
>WENV170854898
MDTA01196887
299032
Bacteroidota
GCC
Gly
>WENV170849752
MDTA01101759
231584
Bacteroidota
TCT
Arg
>WENV170844701
MDTA01010905
231584
Bacteroidota
TCT
Arg
>WENV170844373
MDTA01005127
181598
Bacteroidota
GTT
Asn
>WENV170845093
MDTA01017806
181598
Bacteroidota
GTT
Asn
>WENV170846854
MDTA01049852
181598
Bacteroidota
GTT
Asn
>WENV170853294
MDTA01166589
181598
Bacteroidota
GTT
Asn
>WENV170850714
MDTA01119239
284409
Bacteroidota
CAT
Met
>WENV170847596
MDTA01064006
284409
Bacteroidota
CAT
Met
>WENV170846473
MDTA01043112
284409
Bacteroidota
CAT
Met
>WENV170852582
MDTA01153251
401036
Bacteroidota
CCT
Arg
>WENV170853670
MDTA01174208
182234
Bacteroidota
TGT
Thr
>WENV170852123
MDTA01144013
182234
Bacteroidota
TGT
Thr
>WENV170848670
MDTA01083321
182234
Bacteroidota
TGT
Thr
>WENV170855641
MDTA01209540
24958
Bacteroidota
GGA
Ser
>WENV170849685
MDTA01100234
24958
Bacteroidota
GGA
Ser
>WENV170848126
MDTA01073403
24958
Bacteroidota
GGA
Ser
>WENV170845641
MDTA01027751
24958
Bacteroidota
GGA
Ser
>WENV170853673
MDTA01174208
408604
Bacteroidota
GGT
Thr
>WENV170848016
MDTA01071720
179598
Bacteroidota
CAT
Met
>WENV170852642
MDTA01154378
399343
Bacteroidota
TTC
Glu
>WENV170856446
MDTA01223942
299085
Bacteroidota
TTT
Lys
>WENV170852499
MDTA01151578
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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