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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
143 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170860500
MDTB01051810
360947
Alphaproteobacteria
TTT
Lys
>WENV170864029
MDTB01099661
360947
Alphaproteobacteria
TTT
Lys
>WENV170865350
MDTB01118331
360947
Alphaproteobacteria
TTT
Lys
>WENV170868992
MDTB01170174
360947
Alphaproteobacteria
TTT
Lys
>WENV170869831
MDTB01182921
360947
Alphaproteobacteria
TTT
Lys
>WENV170871581
MDTB01207557
360947
Alphaproteobacteria
TTT
Lys
>WENV170873876
MDTB01238447
360947
Alphaproteobacteria
TTT
Lys
>WENV170874198
MDTB01243079
360947
Alphaproteobacteria
TTT
Lys
>WENV170859596
MDTB01038394
179841
Alphaproteobacteria
CCT
Arg
>WENV170873953
MDTB01239659
179841
Alphaproteobacteria
CCT
Arg
>WENV170870991
MDTB01200147
282745
Alphaproteobacteria
TAC
Val
>WENV170857536
MDTB01010283
334086
Alphaproteobacteria
GGC
Ala
>WENV170863687
MDTB01094600
424450
Alphaproteobacteria
GGT
Thr
>WENV170867991
MDTB01154941
424450
Alphaproteobacteria
GGT
Thr
>WENV170869322
MDTB01174364
424450
Alphaproteobacteria
GGT
Thr
>WENV170862060
MDTB01072644
291892
Alphaproteobacteria
TAC
Val
>WENV170862991
MDTB01084898
29841
Alphaproteobacteria
GGA
Ser
>WENV170868114
MDTB01156874
29841
Alphaproteobacteria
GGA
Ser
>WENV170869988
MDTB01184692
375285
Alphaproteobacteria
TAC
Val
>WENV170862290
MDTB01075853
201940
Alphaproteobacteria
CAT
Met
>WENV170861669
MDTB01067725
201940
Alphaproteobacteria
CAT
Met
>WENV170860889
MDTB01056926
201940
Alphaproteobacteria
CAT
Met
>WENV170860021
MDTB01044931
201940
Alphaproteobacteria
CAT
Met
>WENV170859879
MDTB01042799
201940
Alphaproteobacteria
CAT
Met
>WENV170858791
MDTB01027249
201940
Alphaproteobacteria
CAT
Met
>WENV170858608
MDTB01024903
201940
Alphaproteobacteria
CAT
Met
>WENV170857850
MDTB01014196
201940
Alphaproteobacteria
CAT
Met
>WENV170857626
MDTB01011414
201940
Alphaproteobacteria
CAT
Met
>WENV170856809
MDTB01000551
201940
Alphaproteobacteria
CAT
Met
>WENV170872897
MDTB01224790
201940
Alphaproteobacteria
CAT
Met
>WENV170871340
MDTB01204390
201940
Alphaproteobacteria
CAT
Met
>WENV170870980
MDTB01199993
201940
Alphaproteobacteria
CAT
Met
>WENV170870303
MDTB01189817
201940
Alphaproteobacteria
CAT
Met
>WENV170864619
MDTB01108109
201940
Alphaproteobacteria
CAT
Met
>WENV170864083
MDTB01100504
201940
Alphaproteobacteria
CAT
Met
>WENV170864685
MDTB01108948
201940
Alphaproteobacteria
CAT
Met
>WENV170864951
MDTB01112614
201940
Alphaproteobacteria
CAT
Met
>WENV170865834
MDTB01125016
201940
Alphaproteobacteria
CAT
Met
>WENV170866144
MDTB01128975
201940
Alphaproteobacteria
CAT
Met
>WENV170866370
MDTB01132100
201940
Alphaproteobacteria
CAT
Met
>WENV170867289
MDTB01144575
201940
Alphaproteobacteria
CAT
Met
>WENV170863356
MDTB01090168
400518
Alphaproteobacteria
GAA
Phe
>WENV170867288
MDTB01144575
178263
Alphaproteobacteria
GTG
His
>WENV170864944
MDTB01112547
191064
Alphaproteobacteria
CCG
Arg
>WENV170871861
MDTB01211287
191064
Alphaproteobacteria
CCG
Arg
>WENV170871639
MDTB01208479
191064
Alphaproteobacteria
CCG
Arg
>WENV170873273
MDTB01229938
197241
Alphaproteobacteria
GGG
Pro
>WENV170862474
MDTB01078186
197241
Alphaproteobacteria
GGG
Pro
>WENV170866772
MDTB01137431
197241
Alphaproteobacteria
GGG
Pro
>WENV170866393
MDTB01132501
481268
Alphaproteobacteria
TCC
Gly
>WENV170863527
MDTB01092260
481268
Alphaproteobacteria
TCC
Gly
>WENV170857919
MDTB01015384
481268
Alphaproteobacteria
TCC
Gly
>WENV170872313
MDTB01216782
481268
Alphaproteobacteria
TCC
Gly
>WENV170863005
MDTB01085141
280788
Alphaproteobacteria
TTT
Lys
>WENV170866163
MDTB01129200
280788
Alphaproteobacteria
TTT
Lys
>WENV170867803
MDTB01151887
280788
Alphaproteobacteria
TTT
Lys
>WENV170865589
MDTB01121304
73490
Alphaproteobacteria
GAG
Leu
>WENV170873348
MDTB01230970
73490
Alphaproteobacteria
GAG
Leu
>WENV170869240
MDTB01173140
73490
Alphaproteobacteria
GAG
Leu
>WENV170873599
MDTB01234841
288727
Alphaproteobacteria
>WENV170863484
MDTB01091637
314617
Alphaproteobacteria
TAC
Val
>WENV170873713
MDTB01236478
314617
Alphaproteobacteria
TAC
Val
>WENV170869384
MDTB01175332
314617
Alphaproteobacteria
TAC
Val
>WENV170868935
MDTB01169370
314617
Alphaproteobacteria
TAC
Val
>WENV170864086
MDTB01100533
509917
Alphaproteobacteria
TCC
Gly
>WENV170862123
MDTB01073555
509917
Alphaproteobacteria
TCC
Gly
>WENV170859510
MDTB01037151
509917
Alphaproteobacteria
TCC
Gly
>WENV170873195
MDTB01228845
509917
Alphaproteobacteria
TCC
Gly
>WENV170872291
MDTB01216414
509917
Alphaproteobacteria
TCC
Gly
>WENV170870244
MDTB01188893
509917
Alphaproteobacteria
TCC
Gly
>WENV170869134
MDTB01171880
509917
Alphaproteobacteria
TCC
Gly
>WENV170873571
MDTB01234170
75222
Alphaproteobacteria
GAG
Leu
>WENV170868694
MDTB01165668
75222
Alphaproteobacteria
GAG
Leu
>WENV170862335
MDTB01076355
487436
Alphaproteobacteria
TCC
Gly
>WENV170861581
MDTB01066492
281659
Alphaproteobacteria
TGC
Ala
>WENV170859182
MDTB01032577
400384
Alphaproteobacteria
TTC
Glu
>WENV170871303
MDTB01203926
305403
Alphaproteobacteria
>WENV170873754
MDTB01237036
305403
Alphaproteobacteria
>WENV170865767
MDTB01123817
305403
Alphaproteobacteria
>WENV170867037
MDTB01140865
305403
Alphaproteobacteria
>WENV170867679
MDTB01149749
305403
Alphaproteobacteria
>WENV170861449
MDTB01064597
234690
Alphaproteobacteria
CGG
Pro
>WENV170863173
MDTB01087856
232927
Alphaproteobacteria
CAT
Met
>WENV170859004
MDTB01030277
232927
Alphaproteobacteria
CAT
Met
>WENV170872612
MDTB01220359
232927
Alphaproteobacteria
CAT
Met
>WENV170856784
MDTB01000302
282977
Alphaproteobacteria
CAT
Met
>WENV170868495
MDTB01162651
400514
Alphaproteobacteria
TTG
Gln
>WENV170870990
MDTB01200147
183632
Alphaproteobacteria
GGG
Pro
>WENV170859871
MDTB01042730
427571
Alphaproteobacteria
GCC
Gly
>WENV170872600
MDTB01220182
216373
Alphaproteobacteria
TGG
Pro
>WENV170865010
MDTB01113495
179941
Alphaproteobacteria
CAT
Met
>WENV170869991
MDTB01184752
178509
Alphaproteobacteria
CCT
Arg
>WENV170865980
MDTB01126941
29729
Alphaproteobacteria
GCT
Ser
>WENV170873789
MDTB01237406
317915
Alphaproteobacteria
GAA
Phe
>WENV170859339
MDTB01034775
317915
Alphaproteobacteria
GAA
Phe
>WENV170860498
MDTB01051732
435083
Alphaproteobacteria
>WENV170862220
MDTB01074789
435083
Alphaproteobacteria
>WENV170864072
MDTB01100405
435083
Alphaproteobacteria
>WENV170866988
MDTB01140195
435083
Alphaproteobacteria
>WENV170864873
MDTB01111572
178503
Alphaproteobacteria
GGG
Pro
>WENV170867011
MDTB01140477
178503
Alphaproteobacteria
GGG
Pro
>WENV170861533
MDTB01065794
400517
Alphaproteobacteria
GGT
Thr
>WENV170871588
MDTB01207672
400517
Alphaproteobacteria
GGT
Thr
>WENV170867912
MDTB01153456
281650
Alphaproteobacteria
CCA
Trp
>WENV170867128
MDTB01142116
281650
Alphaproteobacteria
CCA
Trp
>WENV170865989
MDTB01127088
281650
Alphaproteobacteria
CCA
Trp
>WENV170861025
MDTB01058739
281650
Alphaproteobacteria
CCA
Trp
>WENV170860529
MDTB01052378
281650
Alphaproteobacteria
CCA
Trp
>WENV170860434
MDTB01050894
281650
Alphaproteobacteria
CCA
Trp
>WENV170859714
MDTB01040226
281650
Alphaproteobacteria
CCA
Trp
>WENV170871629
MDTB01208338
281650
Alphaproteobacteria
CCA
Trp
>WENV170869725
MDTB01180919
281650
Alphaproteobacteria
CCA
Trp
>WENV170871418
MDTB01205405
481098
Alphaproteobacteria
CTG
Gln
>WENV170861459
MDTB01064719
118213
Alphaproteobacteria
TAG
Leu
>WENV170865418
MDTB01119150
118213
Alphaproteobacteria
TAG
Leu
>WENV170857728
MDTB01012554
427428
Alphaproteobacteria
GCC
Gly
>WENV170870925
MDTB01199394
145377
Alphaproteobacteria
>WENV170870833
MDTB01198203
145377
Alphaproteobacteria
>WENV170870744
MDTB01196703
176490
Alphaproteobacteria
CAT
Met
>WENV170873194
MDTB01228845
176490
Alphaproteobacteria
CAT
Met
>WENV170859197
MDTB01032747
212319
Alphaproteobacteria
GTG
His
>WENV170870179
MDTB01188013
228432
Alphaproteobacteria
TGG
Pro
>WENV170871027
MDTB01200581
228432
Alphaproteobacteria
TGG
Pro
>WENV170872345
MDTB01217174
228432
Alphaproteobacteria
TGG
Pro
>WENV170866323
MDTB01131393
228432
Alphaproteobacteria
TGG
Pro
>WENV170866211
MDTB01129856
403581
Alphaproteobacteria
TTG
Gln
>WENV170868306
MDTB01159598
398994
Alphaproteobacteria
GTT
Asn
>WENV170870568
MDTB01193720
398994
Alphaproteobacteria
GTT
Asn
>WENV170871630
MDTB01208340
398994
Alphaproteobacteria
GTT
Asn
>WENV170874213
MDTB01243362
415537
Alphaproteobacteria
>WENV170857811
MDTB01013599
296763
Alphaproteobacteria
CCA
Trp
>WENV170870920
MDTB01199284
296763
Alphaproteobacteria
CCA
Trp
>WENV170861470
MDTB01064914
178237
Alphaproteobacteria
CAT
Met
>WENV170862307
MDTB01076028
178237
Alphaproteobacteria
CAT
Met
>WENV170860078
MDTB01045715
121990
Alphaproteobacteria
TAG
Leu
>WENV170861534
MDTB01065794
481099
Alphaproteobacteria
TCC
Gly
>WENV170871419
MDTB01205405
480900
Alphaproteobacteria
GCA
Cys
>WENV170870993
MDTB01200147
29739
Alphaproteobacteria
CGA
Ser
>WENV170866334
MDTB01131567
398996
Alphaproteobacteria
GCC
Gly
>WENV170873116
MDTB01227931
308123
Alphaproteobacteria
CCA
Trp
>WENV170871935
MDTB01212265
308123
Alphaproteobacteria
CCA
Trp
>WENV170858175
MDTB01018591
13606
Alphaproteobacteria
GCT
Ser
>WENV170873121
MDTB01227992
338616
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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