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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
120 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170899430
MDTD01139656
360947
Alphaproteobacteria
TTT
Lys
>WENV170897534
MDTD01113012
178510
Alphaproteobacteria
ACG
Arg
>WENV170898293
MDTD01123627
178510
Alphaproteobacteria
ACG
Arg
>WENV170900942
MDTD01162121
178510
Alphaproteobacteria
ACG
Arg
>WENV170901710
MDTD01174853
178510
Alphaproteobacteria
ACG
Arg
>WENV170894568
MDTD01067520
186414
Alphaproteobacteria
CAT
Met
>WENV170903101
MDTD01196526
293691
Alphaproteobacteria
GAA
Phe
>WENV170897966
MDTD01119145
400848
Alphaproteobacteria
GAC
Val
>WENV170896312
MDTD01093717
402222
Alphaproteobacteria
GTT
Asn
>WENV170902448
MDTD01185305
402222
Alphaproteobacteria
GTT
Asn
>WENV170891799
MDTD01029210
481048
Alphaproteobacteria
GCA
Cys
>WENV170898614
MDTD01128899
29749
Alphaproteobacteria
GGA
Ser
>WENV170901320
MDTD01168512
29749
Alphaproteobacteria
GGA
Ser
>WENV170892417
MDTD01038031
424450
Alphaproteobacteria
GGT
Thr
>WENV170900779
MDTD01159370
290029
Alphaproteobacteria
TGT
Thr
>WENV170893470
MDTD01052161
404592
Alphaproteobacteria
GGT
Thr
>WENV170897397
MDTD01111044
179390
Alphaproteobacteria
TGG
Pro
>WENV170891323
MDTD01022414
193463
Alphaproteobacteria
CCT
Arg
>WENV170899797
MDTD01144839
210530
Alphaproteobacteria
CGG
Pro
>WENV170892910
MDTD01044820
176240
Alphaproteobacteria
CAT
Met
>WENV170899458
MDTD01140099
140963
Alphaproteobacteria
>WENV170894398
MDTD01064890
201940
Alphaproteobacteria
CAT
Met
>WENV170894017
MDTD01059622
201940
Alphaproteobacteria
CAT
Met
>WENV170892447
MDTD01038405
201940
Alphaproteobacteria
CAT
Met
>WENV170892089
MDTD01033735
201940
Alphaproteobacteria
CAT
Met
>WENV170891597
MDTD01026197
201940
Alphaproteobacteria
CAT
Met
>WENV170896135
MDTD01090739
201940
Alphaproteobacteria
CAT
Met
>WENV170896351
MDTD01094270
201940
Alphaproteobacteria
CAT
Met
>WENV170898006
MDTD01119691
201940
Alphaproteobacteria
CAT
Met
>WENV170900361
MDTD01153121
201940
Alphaproteobacteria
CAT
Met
>WENV170900307
MDTD01152376
287529
Alphaproteobacteria
TAC
Val
>WENV170896891
MDTD01102650
400530
Alphaproteobacteria
GAC
Val
>WENV170894953
MDTD01072991
197241
Alphaproteobacteria
GGG
Pro
>WENV170894638
MDTD01068517
197241
Alphaproteobacteria
GGG
Pro
>WENV170893184
MDTD01049047
197241
Alphaproteobacteria
GGG
Pro
>WENV170890266
MDTD01007390
197241
Alphaproteobacteria
GGG
Pro
>WENV170889997
MDTD01003509
290043
Alphaproteobacteria
TGC
Ala
>WENV170890184
MDTD01006077
481268
Alphaproteobacteria
TCC
Gly
>WENV170890570
MDTD01012033
481268
Alphaproteobacteria
TCC
Gly
>WENV170896031
MDTD01089053
481268
Alphaproteobacteria
TCC
Gly
>WENV170896173
MDTD01091233
481268
Alphaproteobacteria
TCC
Gly
>WENV170897010
MDTD01104573
481268
Alphaproteobacteria
TCC
Gly
>WENV170894376
MDTD01064506
178731
Alphaproteobacteria
GTC
Asp
>WENV170891153
MDTD01020017
178731
Alphaproteobacteria
GTC
Asp
>WENV170891938
MDTD01031564
285028
Alphaproteobacteria
CTT
Lys
>WENV170896680
MDTD01099311
400516
Alphaproteobacteria
TTG
Gln
>WENV170891476
MDTD01024488
75222
Alphaproteobacteria
GAG
Leu
>WENV170895501
MDTD01080285
399480
Alphaproteobacteria
GAA
Phe
>WENV170901226
MDTD01166967
487436
Alphaproteobacteria
TCC
Gly
>WENV170896594
MDTD01098090
400384
Alphaproteobacteria
TTC
Glu
>WENV170900712
MDTD01158301
284764
Alphaproteobacteria
CAT
Met
>WENV170900115
MDTD01149412
234690
Alphaproteobacteria
CGG
Pro
>WENV170900400
MDTD01153956
232927
Alphaproteobacteria
CAT
Met
>WENV170893136
MDTD01048349
97838
Alphaproteobacteria
GAG
Leu
>WENV170898564
MDTD01127887
97838
Alphaproteobacteria
GAG
Leu
>WENV170903439
MDTD01201890
178734
Alphaproteobacteria
TGG
Pro
>WENV170897897
MDTD01118459
178734
Alphaproteobacteria
TGG
Pro
>WENV170889996
MDTD01003482
178815
Alphaproteobacteria
GGG
Pro
>WENV170891281
MDTD01021887
178815
Alphaproteobacteria
GGG
Pro
>WENV170902431
MDTD01185144
181950
Alphaproteobacteria
TCT
Arg
>WENV170896000
MDTD01088501
181950
Alphaproteobacteria
TCT
Arg
>WENV170892842
MDTD01043399
121250
Alphaproteobacteria
TAG
Leu
>WENV170903438
MDTD01201890
178733
Alphaproteobacteria
CAT
Met
>WENV170893117
MDTD01048001
427571
Alphaproteobacteria
GCC
Gly
>WENV170893212
MDTD01049402
427571
Alphaproteobacteria
GCC
Gly
>WENV170897226
MDTD01107937
141247
Alphaproteobacteria
CAA
Leu
>WENV170893873
MDTD01057578
176153
Alphaproteobacteria
CAT
Met
>WENV170903227
MDTD01198459
183628
Alphaproteobacteria
CCG
Arg
>WENV170893071
MDTD01047163
400250
Alphaproteobacteria
GAC
Val
>WENV170892770
MDTD01042501
33571
Alphaproteobacteria
TGA
Ser
>WENV170901128
MDTD01165338
198858
Alphaproteobacteria
CAT
Met
>WENV170902130
MDTD01180420
192275
Alphaproteobacteria
GTG
His
>WENV170890082
MDTD01004544
199130
Alphaproteobacteria
GAT
Ile
>WENV170892572
MDTD01039745
400544
Alphaproteobacteria
GGT
Thr
>WENV170902326
MDTD01183321
400544
Alphaproteobacteria
GGT
Thr
>WENV170902679
MDTD01189594
400517
Alphaproteobacteria
GGT
Thr
>WENV170890036
MDTD01003980
400517
Alphaproteobacteria
GGT
Thr
>WENV170901057
MDTD01164015
281650
Alphaproteobacteria
CCA
Trp
>WENV170899948
MDTD01147271
118213
Alphaproteobacteria
TAG
Leu
>WENV170894472
MDTD01066132
98340
Alphaproteobacteria
CAG
Leu
>WENV170898396
MDTD01125295
402795
Alphaproteobacteria
GCC
Gly
>WENV170902568
MDTD01187414
282658
Alphaproteobacteria
CGT
Thr
>WENV170895967
MDTD01087934
145377
Alphaproteobacteria
>WENV170890604
MDTD01012840
145377
Alphaproteobacteria
>WENV170901582
MDTD01172558
453762
Alphaproteobacteria
CAC
Val
>WENV170893103
MDTD01047733
400029
Alphaproteobacteria
GGT
Thr
>WENV170890264
MDTD01007383
228432
Alphaproteobacteria
TGG
Pro
>WENV170890512
MDTD01011041
178736
Alphaproteobacteria
CCT
Arg
>WENV170890573
MDTD01012084
398994
Alphaproteobacteria
GTT
Asn
>WENV170891019
MDTD01018026
398994
Alphaproteobacteria
GTT
Asn
>WENV170891042
MDTD01018331
398994
Alphaproteobacteria
GTT
Asn
>WENV170891309
MDTD01022224
398994
Alphaproteobacteria
GTT
Asn
>WENV170891440
MDTD01023980
398994
Alphaproteobacteria
GTT
Asn
>WENV170901171
MDTD01165965
398994
Alphaproteobacteria
GTT
Asn
>WENV170901251
MDTD01167403
398994
Alphaproteobacteria
GTT
Asn
>WENV170892881
MDTD01044195
350583
Alphaproteobacteria
TAC
Val
>WENV170898401
MDTD01125387
345907
Alphaproteobacteria
CGT
Thr
>WENV170890390
MDTD01009008
282981
Alphaproteobacteria
CCA
Trp
>WENV170893784
MDTD01056385
178507
Alphaproteobacteria
GTG
His
>WENV170902980
MDTD01194776
353624
Alphaproteobacteria
CCA
Trp
>WENV170902562
MDTD01187296
29590
Alphaproteobacteria
CGA
Ser
>WENV170902406
MDTD01184821
296763
Alphaproteobacteria
CCA
Trp
>WENV170893110
MDTD01047938
178237
Alphaproteobacteria
CAT
Met
>WENV170903345
MDTD01200165
178237
Alphaproteobacteria
CAT
Met
>WENV170894613
MDTD01068217
282843
Alphaproteobacteria
TAC
Val
>WENV170897679
MDTD01115711
282843
Alphaproteobacteria
TAC
Val
>WENV170900567
MDTD01156203
282843
Alphaproteobacteria
TAC
Val
>WENV170902270
MDTD01182516
481099
Alphaproteobacteria
TCC
Gly
>WENV170895309
MDTD01077550
481099
Alphaproteobacteria
TCC
Gly
>WENV170897335
MDTD01109992
481099
Alphaproteobacteria
TCC
Gly
>WENV170895555
MDTD01081350
480900
Alphaproteobacteria
GCA
Cys
>WENV170891241
MDTD01021253
190609
Alphaproteobacteria
TCT
Arg
>WENV170896155
MDTD01090964
336192
Alphaproteobacteria
TTC
Glu
>WENV170896593
MDTD01098090
178505
Alphaproteobacteria
CCG
Arg
>WENV170893104
MDTD01047733
400693
Alphaproteobacteria
GCC
Gly
>WENV170901122
MDTD01165231
305449
Alphaproteobacteria
CGT
Thr
>WENV170901657
MDTD01174025
13340
Alphaproteobacteria
GCT
Ser
>WENV170897809
MDTD01117491
13340
Alphaproteobacteria
GCT
Ser
>WENV170900901
MDTD01161375
73523
Alphaproteobacteria
CAG
Leu
>WENV170890601
MDTD01012840
366050
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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