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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170903554
MDTE01000198
360947
Alphaproteobacteria
TTT
Lys
>WENV170904835
MDTE01017408
193373
Alphaproteobacteria
CGG
Pro
>WENV170909672
MDTE01081298
296698
Alphaproteobacteria
CGC
Ala
>WENV170916858
MDTE01184053
296698
Alphaproteobacteria
CGC
Ala
>WENV170909678
MDTE01081298
282745
Alphaproteobacteria
TAC
Val
>WENV170905162
MDTE01021787
334086
Alphaproteobacteria
GGC
Ala
>WENV170905496
MDTE01026089
334086
Alphaproteobacteria
GGC
Ala
>WENV170907094
MDTE01047707
334086
Alphaproteobacteria
GGC
Ala
>WENV170910984
MDTE01099270
193463
Alphaproteobacteria
CCT
Arg
>WENV170915507
MDTE01164752
210530
Alphaproteobacteria
CGG
Pro
>WENV170914955
MDTE01156102
210530
Alphaproteobacteria
CGG
Pro
>WENV170912521
MDTE01121957
282589
Alphaproteobacteria
GGC
Ala
>WENV170906188
MDTE01035270
20437
Alphaproteobacteria
GGA
Ser
>WENV170907619
MDTE01054019
20437
Alphaproteobacteria
GGA
Ser
>WENV170917781
MDTE01197292
201940
Alphaproteobacteria
CAT
Met
>WENV170915551
MDTE01165410
201940
Alphaproteobacteria
CAT
Met
>WENV170915279
MDTE01161217
201940
Alphaproteobacteria
CAT
Met
>WENV170912505
MDTE01121774
201940
Alphaproteobacteria
CAT
Met
>WENV170911315
MDTE01103983
201940
Alphaproteobacteria
CAT
Met
>WENV170909941
MDTE01085093
201940
Alphaproteobacteria
CAT
Met
>WENV170909676
MDTE01081298
201940
Alphaproteobacteria
CAT
Met
>WENV170909547
MDTE01079598
201940
Alphaproteobacteria
CAT
Met
>WENV170907859
MDTE01057386
201940
Alphaproteobacteria
CAT
Met
>WENV170907130
MDTE01048029
201940
Alphaproteobacteria
CAT
Met
>WENV170906621
MDTE01041119
201940
Alphaproteobacteria
CAT
Met
>WENV170905202
MDTE01022479
201940
Alphaproteobacteria
CAT
Met
>WENV170917875
MDTE01198872
400518
Alphaproteobacteria
GAA
Phe
>WENV170913067
MDTE01129357
400518
Alphaproteobacteria
GAA
Phe
>WENV170907919
MDTE01058369
400518
Alphaproteobacteria
GAA
Phe
>WENV170909675
MDTE01081298
178263
Alphaproteobacteria
GTG
His
>WENV170906342
MDTE01037366
400530
Alphaproteobacteria
GAC
Val
>WENV170915462
MDTE01164158
400530
Alphaproteobacteria
GAC
Val
>WENV170915722
MDTE01168107
400530
Alphaproteobacteria
GAC
Val
>WENV170918086
MDTE01201698
481268
Alphaproteobacteria
TCC
Gly
>WENV170906787
MDTE01043517
288727
Alphaproteobacteria
>WENV170913061
MDTE01129357
288727
Alphaproteobacteria
>WENV170905737
MDTE01029353
178731
Alphaproteobacteria
GTC
Asp
>WENV170904272
MDTE01010135
400516
Alphaproteobacteria
TTG
Gln
>WENV170912201
MDTE01117286
400516
Alphaproteobacteria
TTG
Gln
>WENV170914868
MDTE01155086
400516
Alphaproteobacteria
TTG
Gln
>WENV170915440
MDTE01163788
400516
Alphaproteobacteria
TTG
Gln
>WENV170907515
MDTE01052869
487436
Alphaproteobacteria
TCC
Gly
>WENV170908492
MDTE01065280
25643
Alphaproteobacteria
GGA
Ser
>WENV170910044
MDTE01086179
305403
Alphaproteobacteria
>WENV170909951
MDTE01085170
232927
Alphaproteobacteria
CAT
Met
>WENV170913065
MDTE01129357
282977
Alphaproteobacteria
CAT
Met
>WENV170916240
MDTE01175377
178734
Alphaproteobacteria
TGG
Pro
>WENV170906688
MDTE01042068
29702
Alphaproteobacteria
GGA
Ser
>WENV170909677
MDTE01081298
183632
Alphaproteobacteria
GGG
Pro
>WENV170912688
MDTE01124210
121250
Alphaproteobacteria
TAG
Leu
>WENV170904242
MDTE01009553
121250
Alphaproteobacteria
TAG
Leu
>WENV170910354
MDTE01090830
178733
Alphaproteobacteria
CAT
Met
>WENV170916239
MDTE01175377
178733
Alphaproteobacteria
CAT
Met
>WENV170915911
MDTE01170552
427571
Alphaproteobacteria
GCC
Gly
>WENV170906998
MDTE01046519
178509
Alphaproteobacteria
CCT
Arg
>WENV170916553
MDTE01179749
176153
Alphaproteobacteria
CAT
Met
>WENV170912532
MDTE01122132
176153
Alphaproteobacteria
CAT
Met
>WENV170911523
MDTE01107328
176153
Alphaproteobacteria
CAT
Met
>WENV170908036
MDTE01059827
176153
Alphaproteobacteria
CAT
Met
>WENV170907804
MDTE01056725
176153
Alphaproteobacteria
CAT
Met
>WENV170905432
MDTE01025410
176153
Alphaproteobacteria
CAT
Met
>WENV170913195
MDTE01131044
435083
Alphaproteobacteria
>WENV170915070
MDTE01157777
192275
Alphaproteobacteria
GTG
His
>WENV170917680
MDTE01195858
400544
Alphaproteobacteria
GGT
Thr
>WENV170909870
MDTE01084053
400544
Alphaproteobacteria
GGT
Thr
>WENV170906530
MDTE01039872
400544
Alphaproteobacteria
GGT
Thr
>WENV170912254
MDTE01117891
400517
Alphaproteobacteria
GGT
Thr
>WENV170912702
MDTE01124409
400517
Alphaproteobacteria
GGT
Thr
>WENV170918136
MDTE01202421
400517
Alphaproteobacteria
GGT
Thr
>WENV170907647
MDTE01054370
419842
Alphaproteobacteria
GCC
Gly
>WENV170915845
MDTE01169661
419842
Alphaproteobacteria
GCC
Gly
>WENV170918251
MDTE01203810
481098
Alphaproteobacteria
CTG
Gln
>WENV170912575
MDTE01122795
481098
Alphaproteobacteria
CTG
Gln
>WENV170904348
MDTE01010952
481098
Alphaproteobacteria
CTG
Gln
>WENV170909685
MDTE01081361
118066
Alphaproteobacteria
TAG
Leu
>WENV170906635
MDTE01041407
334158
Alphaproteobacteria
CTT
Lys
>WENV170906980
MDTE01046279
228432
Alphaproteobacteria
TGG
Pro
>WENV170908767
MDTE01068933
488318
Alphaproteobacteria
TCC
Gly
>WENV170908060
MDTE01060113
178736
Alphaproteobacteria
CCT
Arg
>WENV170903604
MDTE01000532
398994
Alphaproteobacteria
GTT
Asn
>WENV170911314
MDTE01103960
398994
Alphaproteobacteria
GTT
Asn
>WENV170912527
MDTE01122064
398994
Alphaproteobacteria
GTT
Asn
>WENV170916298
MDTE01176257
350583
Alphaproteobacteria
TAC
Val
>WENV170917527
MDTE01193849
345907
Alphaproteobacteria
CGT
Thr
>WENV170914655
MDTE01151540
345907
Alphaproteobacteria
CGT
Thr
>WENV170904180
MDTE01008517
400106
Alphaproteobacteria
GTT
Asn
>WENV170904809
MDTE01016969
315852
Alphaproteobacteria
TGT
Thr
>WENV170909803
MDTE01083025
296763
Alphaproteobacteria
CCA
Trp
>WENV170909540
MDTE01079555
296763
Alphaproteobacteria
CCA
Trp
>WENV170908862
MDTE01070036
296763
Alphaproteobacteria
CCA
Trp
>WENV170907786
MDTE01056577
296763
Alphaproteobacteria
CCA
Trp
>WENV170906966
MDTE01046116
178237
Alphaproteobacteria
CAT
Met
>WENV170907355
MDTE01050868
481099
Alphaproteobacteria
TCC
Gly
>WENV170912703
MDTE01124409
481099
Alphaproteobacteria
TCC
Gly
>WENV170917155
MDTE01188535
428327
Alphaproteobacteria
GCC
Gly
>WENV170904349
MDTE01010952
480900
Alphaproteobacteria
GCA
Cys
>WENV170913394
MDTE01133978
480900
Alphaproteobacteria
GCA
Cys
>WENV170917526
MDTE01193849
480900
Alphaproteobacteria
GCA
Cys
>WENV170905701
MDTE01028946
29739
Alphaproteobacteria
CGA
Ser
>WENV170909673
MDTE01081298
29739
Alphaproteobacteria
CGA
Ser
>WENV170908608
MDTE01067326
308123
Alphaproteobacteria
CCA
Trp
>WENV170906557
MDTE01040365
13606
Alphaproteobacteria
GCT
Ser
>WENV170912974
MDTE01128348
13606
Alphaproteobacteria
GCT
Ser
>WENV170914446
MDTE01148652
13340
Alphaproteobacteria
GCT
Ser
>WENV170915005
MDTE01156895
73523
Alphaproteobacteria
CAG
Leu
>WENV170906425
MDTE01038451
73523
Alphaproteobacteria
CAG
Leu
>WENV170904542
MDTE01013343
73523
Alphaproteobacteria
CAG
Leu
>WENV170904347
MDTE01010952
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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