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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170907274
MDTE01049854
282894
Gammaproteobacteria
GAA
Phe
>WENV170912795
MDTE01125522
282894
Gammaproteobacteria
GAA
Phe
>WENV170910363
MDTE01090943
284706
Gammaproteobacteria
GTT
Asn
>WENV170910408
MDTE01091699
284706
Gammaproteobacteria
GTT
Asn
>WENV170917819
MDTE01197904
284706
Gammaproteobacteria
GTT
Asn
>WENV170917961
MDTE01200031
284706
Gammaproteobacteria
GTT
Asn
>WENV170903648
MDTE01001185
73123
Gammaproteobacteria
CAA
Leu
>WENV170917759
MDTE01196979
183804
Gammaproteobacteria
CAT
Met
>WENV170914476
MDTE01148980
297858
Gammaproteobacteria
TGC
Ala
>WENV170917545
MDTE01194111
178539
Gammaproteobacteria
GAC
Val
>WENV170917546
MDTE01194111
178539
Gammaproteobacteria
GAC
Val
>WENV170913608
MDTE01136908
178164
Gammaproteobacteria
GAT
Ile
>WENV170914464
MDTE01148858
318157
Gammaproteobacteria
GTT
Asn
>WENV170914465
MDTE01148858
318157
Gammaproteobacteria
GTT
Asn
>WENV170916913
MDTE01184849
74766
Gammaproteobacteria
CAG
Leu
>WENV170906818
MDTE01044010
281275
Gammaproteobacteria
TGT
Thr
>WENV170915243
MDTE01160561
299414
Gammaproteobacteria
TTT
Lys
>WENV170917470
MDTE01193127
118218
Gammaproteobacteria
TAG
Leu
>WENV170915806
MDTE01169154
176554
Gammaproteobacteria
CAT
Met
>WENV170913590
MDTE01136770
176662
Gammaproteobacteria
ACG
Arg
>WENV170913591
MDTE01136770
176662
Gammaproteobacteria
ACG
Arg
>WENV170914786
MDTE01153841
176662
Gammaproteobacteria
ACG
Arg
>WENV170912278
MDTE01118196
20618
Gammaproteobacteria
GGA
Ser
>WENV170911988
MDTE01113907
197233
Gammaproteobacteria
CAT
Met
>WENV170908542
MDTE01066153
120827
Gammaproteobacteria
GAG
Leu
>WENV170913589
MDTE01136770
29834
Gammaproteobacteria
GCT
Ser
>WENV170904780
MDTE01016703
292194
Gammaproteobacteria
GGT
Thr
>WENV170914066
MDTE01142773
353123
Gammaproteobacteria
CCA
Trp
>WENV170910379
MDTE01091133
353123
Gammaproteobacteria
CCA
Trp
>WENV170909546
MDTE01079588
353123
Gammaproteobacteria
CCA
Trp
>WENV170909024
MDTE01072625
353123
Gammaproteobacteria
CCA
Trp
>WENV170908935
MDTE01071130
353123
Gammaproteobacteria
CCA
Trp
>WENV170907200
MDTE01048861
353123
Gammaproteobacteria
CCA
Trp
>WENV170906875
MDTE01044879
176520
Gammaproteobacteria
CAT
Met
>WENV170906729
MDTE01042339
73501
Gammaproteobacteria
GAG
Leu
>WENV170917598
MDTE01194736
483085
Gammaproteobacteria
GCA
Cys
>WENV170905831
MDTE01030417
483085
Gammaproteobacteria
GCA
Cys
>WENV170908523
MDTE01065748
281282
Gammaproteobacteria
TTC
Glu
>WENV170911987
MDTE01113907
444310
Gammaproteobacteria
TTG
Gln
>WENV170913701
MDTE01138076
178535
Gammaproteobacteria
CCT
Arg
>WENV170913828
MDTE01139701
176663
Gammaproteobacteria
GGG
Pro
>WENV170910726
MDTE01096078
178471
Gammaproteobacteria
GTT
Asn
>WENV170910727
MDTE01096078
178471
Gammaproteobacteria
GTT
Asn
>WENV170914634
MDTE01151323
313852
Gammaproteobacteria
TTC
Glu
>WENV170908090
MDTE01060249
313852
Gammaproteobacteria
TTC
Glu
>WENV170908086
MDTE01060249
313852
Gammaproteobacteria
TTC
Glu
>WENV170908084
MDTE01060249
313852
Gammaproteobacteria
TTC
Glu
>WENV170905112
MDTE01021372
222399
Gammaproteobacteria
ACG
Arg
>WENV170914285
MDTE01146266
351236
Gammaproteobacteria
TTT
Lys
>WENV170914284
MDTE01146266
351236
Gammaproteobacteria
TTT
Lys
>WENV170903994
MDTE01006062
178540
Gammaproteobacteria
TGG
Pro
>WENV170907210
MDTE01048929
73498
Gammaproteobacteria
CAA
Leu
>WENV170912144
MDTE01116450
178168
Gammaproteobacteria
ACG
Arg
>WENV170912092
MDTE01115358
480516
Gammaproteobacteria
GCA
Cys
>WENV170914282
MDTE01146266
181513
Gammaproteobacteria
TGG
Pro
>WENV170913887
MDTE01140332
181513
Gammaproteobacteria
TGG
Pro
>WENV170903904
MDTE01004473
350703
Gammaproteobacteria
TTT
Lys
>WENV170910207
MDTE01088723
242732
Gammaproteobacteria
ACG
Arg
>WENV170910208
MDTE01088723
242732
Gammaproteobacteria
ACG
Arg
>WENV170916887
MDTE01184497
243308
Gammaproteobacteria
TGG
Pro
>WENV170913170
MDTE01130808
243308
Gammaproteobacteria
TGG
Pro
>WENV170912442
MDTE01120979
243308
Gammaproteobacteria
TGG
Pro
>WENV170904130
MDTE01007994
243308
Gammaproteobacteria
TGG
Pro
>WENV170909545
MDTE01079588
443066
Gammaproteobacteria
GGT
Thr
>WENV170908532
MDTE01066077
197498
Gammaproteobacteria
TGG
Pro
>WENV170916976
MDTE01185809
197498
Gammaproteobacteria
TGG
Pro
>WENV170916889
MDTE01184497
291402
Gammaproteobacteria
GTG
His
>WENV170909215
MDTE01075253
401684
Gammaproteobacteria
CCT
Arg
>WENV170914158
MDTE01144179
178169
Gammaproteobacteria
GAC
Val
>WENV170905889
MDTE01030935
74048
Gammaproteobacteria
CAA
Leu
>WENV170909963
MDTE01085313
481678
Gammaproteobacteria
GCA
Cys
>WENV170907099
MDTE01047735
306288
Gammaproteobacteria
GCC
Gly
>WENV170912091
MDTE01115358
306288
Gammaproteobacteria
GCC
Gly
>WENV170913476
MDTE01134964
306288
Gammaproteobacteria
GCC
Gly
>WENV170910023
MDTE01085995
176664
Gammaproteobacteria
CCT
Arg
>WENV170910803
MDTE01096812
334421
Gammaproteobacteria
TGT
Thr
>WENV170914286
MDTE01146307
346373
Gammaproteobacteria
GAA
Phe
>WENV170916911
MDTE01184774
346373
Gammaproteobacteria
GAA
Phe
>WENV170916235
MDTE01175328
488965
Gammaproteobacteria
GCA
Cys
>WENV170912679
MDTE01124048
488965
Gammaproteobacteria
GCA
Cys
>WENV170907192
MDTE01048817
488965
Gammaproteobacteria
GCA
Cys
>WENV170904886
MDTE01018204
488965
Gammaproteobacteria
GCA
Cys
>WENV170904182
MDTE01008543
178550
Gammaproteobacteria
ACG
Arg
>WENV170904183
MDTE01008543
178550
Gammaproteobacteria
ACG
Arg
>WENV170916390
MDTE01177426
180680
Gammaproteobacteria
GAC
Val
>WENV170917212
MDTE01189495
176301
Gammaproteobacteria
GAT
Ile
>WENV170912577
MDTE01122837
176301
Gammaproteobacteria
GAT
Ile
>WENV170912022
MDTE01114389
89769
Gammaproteobacteria
CAG
Leu
>WENV170907667
MDTE01054783
89769
Gammaproteobacteria
CAG
Leu
>WENV170908746
MDTE01068659
296672
Gammaproteobacteria
GGT
Thr
>WENV170916502
MDTE01178804
176665
Gammaproteobacteria
CGG
Pro
>WENV170907389
MDTE01051314
285547
Gammaproteobacteria
TTG
Gln
>WENV170904181
MDTE01008543
8667
Gammaproteobacteria
GCT
Ser
>WENV170911704
MDTE01110018
201377
Gammaproteobacteria
TGG
Pro
>WENV170911502
MDTE01106977
201377
Gammaproteobacteria
TGG
Pro
>WENV170909655
MDTE01081059
201377
Gammaproteobacteria
TGG
Pro
>WENV170904748
MDTE01016207
201377
Gammaproteobacteria
TGG
Pro
>WENV170904455
MDTE01012297
282018
Gammaproteobacteria
TGT
Thr
>WENV170912444
MDTE01120979
281283
Gammaproteobacteria
GTG
His
>WENV170906035
MDTE01032950
300318
Gammaproteobacteria
GGC
Ala
>WENV170912952
MDTE01128032
176478
Gammaproteobacteria
CAT
Met
>WENV170914425
MDTE01148363
119044
Gammaproteobacteria
GTA
Tyr
>WENV170908744
MDTE01068659
141076
Gammaproteobacteria
GTA
Tyr
>WENV170909543
MDTE01079588
140861
Gammaproteobacteria
GTA
Tyr
>WENV170913479
MDTE01135007
178533
Gammaproteobacteria
GGG
Pro
>WENV170915300
MDTE01161508
180679
Gammaproteobacteria
CCA
Trp
>WENV170912145
MDTE01116462
180679
Gammaproteobacteria
CCA
Trp
>WENV170905078
MDTE01020981
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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