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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170920125
MDTF01015199
20664
Gammaproteobacteria
GCT
Ser
>WENV170920589
MDTF01018934
314350
Gammaproteobacteria
CCA
Trp
>WENV170920212
MDTF01015966
176796
Gammaproteobacteria
GGG
Pro
>WENV170918992
MDTF01005210
191061
Gammaproteobacteria
ACG
Arg
>WENV170919848
MDTF01012787
20618
Gammaproteobacteria
GGA
Ser
>WENV170918969
MDTF01005052
284022
Gammaproteobacteria
TGT
Thr
>WENV170920051
MDTF01014549
178471
Gammaproteobacteria
GTT
Asn
>WENV170920052
MDTF01014549
178471
Gammaproteobacteria
GTT
Asn
>WENV170918679
MDTF01002556
184459
Gammaproteobacteria
CAT
Met
>WENV170920201
MDTF01015882
306288
Gammaproteobacteria
GCC
Gly
>WENV170919902
MDTF01013352
306288
Gammaproteobacteria
GCC
Gly
>WENV170919190
MDTF01006910
176544
Gammaproteobacteria
CAT
Met
>WENV170919849
MDTF01012787
180680
Gammaproteobacteria
GAC
Val
>WENV170920202
MDTF01015882
490297
Gammaproteobacteria
GCA
Cys
>WENV170919192
MDTF01006910
180681
Gammaproteobacteria
TGG
Pro
>WENV170920112
MDTF01015093
180681
Gammaproteobacteria
TGG
Pro
>WENV170920113
MDTF01015093
184424
Gammaproteobacteria
TCT
Arg
>WENV170919191
MDTF01006910
118640
Gammaproteobacteria
TAG
Leu
>WENV170919852
MDTF01012834
186591
Gammaproteobacteria
ACG
Arg
>WENV170918972
MDTF01005052
285826
Gammaproteobacteria
GGT
Thr
>WENV170919918
MDTF01013512
180679
Gammaproteobacteria
CCA
Trp
>WENV170920581
MDTF01018871
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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