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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170960992
MKWU01072581
284706
Gammaproteobacteria
GTT
Asn
>WENV170959420
MKWU01004941
330672
Gammaproteobacteria
>WENV170959002
MKWU01002645
56418
Gammaproteobacteria
GGA
Ser
>WENV170959049
MKWU01002817
56418
Gammaproteobacteria
GGA
Ser
>WENV170960511
MKWU01033242
178164
Gammaproteobacteria
GAT
Ile
>WENV170960709
MKWU01045372
178164
Gammaproteobacteria
GAT
Ile
>WENV170958584
MKWU01001415
299414
Gammaproteobacteria
TTT
Lys
>WENV170957647
MKWU01000102
340901
Gammaproteobacteria
CCA
Trp
>WENV170960611
MKWU01039387
340901
Gammaproteobacteria
CCA
Trp
>WENV170958608
MKWU01001472
480653
Gammaproteobacteria
GCA
Cys
>WENV170958129
MKWU01000544
285363
Gammaproteobacteria
TGT
Thr
>WENV170960961
MKWU01068945
481357
Gammaproteobacteria
GCA
Cys
>WENV170958399
MKWU01000987
220813
Gammaproteobacteria
CCG
Arg
>WENV170960345
MKWU01024954
222399
Gammaproteobacteria
ACG
Arg
>WENV170957771
MKWU01000168
243308
Gammaproteobacteria
TGG
Pro
>WENV170958219
MKWU01000639
292174
Gammaproteobacteria
GAA
Phe
>WENV170960465
MKWU01030658
237764
Gammaproteobacteria
GAT
Ile
>WENV170961173
MKWU01091011
237764
Gammaproteobacteria
GAT
Ile
>WENV170960183
MKWU01018273
177028
Gammaproteobacteria
CAT
Met
>WENV170961287
MKWU01108858
480368
Gammaproteobacteria
CCC
Gly
>WENV170958121
MKWU01000542
197991
Gammaproteobacteria
ACG
Arg
>WENV170959297
MKWU01004037
281418
Gammaproteobacteria
TGC
Ala
>WENV170959296
MKWU01004037
176301
Gammaproteobacteria
GAT
Ile
>WENV170960553
MKWU01036065
201377
Gammaproteobacteria
TGG
Pro
>WENV170960166
MKWU01017744
78655
Gammaproteobacteria
CAG
Leu
>WENV170960163
MKWU01017618
198943
Gammaproteobacteria
CAT
Met
>WENV170960559
MKWU01036424
119044
Gammaproteobacteria
GTA
Tyr
>WENV170958124
MKWU01000544
141076
Gammaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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