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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170961298
MLJW01000001
26144
Betaproteobacteria
CGA
Ser
>WENV170961335
MLJW01000008
284938
Betaproteobacteria
TTT
Lys
>WENV170961334
MLJW01000008
178141
Betaproteobacteria
CAT
Met
>WENV170961339
MLJW01000008
499230
Betaproteobacteria
TCC
Gly
>WENV170961376
MLJW01000020
284938
Betaproteobacteria
TTT
Lys
>WENV170961383
MLJW01000021
239991
Betaproteobacteria
TGG
Pro
>WENV170961384
MLJW01000021
176850
Betaproteobacteria
TCT
Arg
>WENV170961387
MLJW01000021
186768
Betaproteobacteria
>WENV170961391
MLJW01000022
88494
Betaproteobacteria
CAG
Leu
>WENV170961403
MLJW01000026
176850
Betaproteobacteria
TCT
Arg
>WENV170961406
MLJW01000026
88494
Betaproteobacteria
CAG
Leu
>WENV170961413
MLJW01000029
380796
Betaproteobacteria
GAA
Phe
>WENV170961418
MLJW01000031
499230
Betaproteobacteria
TCC
Gly
>WENV170961437
MLJW01000041
192191
Betaproteobacteria
CAT
Met
>WENV170961451
MLJW01000047
284938
Betaproteobacteria
TTT
Lys
>WENV170961450
MLJW01000047
178141
Betaproteobacteria
CAT
Met
>WENV170961457
MLJW01000054
117806
Betaproteobacteria
GTA
Tyr
>WENV170961462
MLJW01000056
229245
Betaproteobacteria
GAT
Ile
>WENV170961463
MLJW01000056
340615
Betaproteobacteria
TGC
Ala
>WENV170961465
MLJW01000057
284666
Betaproteobacteria
TAC
Val
>WENV170961475
MLJW01000065
281431
Betaproteobacteria
GTT
Asn
>WENV170961478
MLJW01000067
380796
Betaproteobacteria
GAA
Phe
>WENV170961486
MLJW01000077
178141
Betaproteobacteria
CAT
Met
>WENV170961517
MLJW01000104
328243
Betaproteobacteria
CCG
Arg
>WENV170961526
MLJW01000110
179863
Betaproteobacteria
TGG
Pro
>WENV170961556
MLJW01000149
494612
Betaproteobacteria
GCA
Cys
>WENV170961561
MLJW01000152
176850
Betaproteobacteria
TCT
Arg
>WENV170961583
MLJW01000182
400624
Betaproteobacteria
GGT
Thr
>WENV170961589
MLJW01000192
176850
Betaproteobacteria
TCT
Arg
>WENV170961591
MLJW01000193
185257
Betaproteobacteria
CAT
Met
>WENV170961610
MLJW01000232
179863
Betaproteobacteria
TGG
Pro
>WENV170961618
MLJW01000240
480566
Betaproteobacteria
GCA
Cys
>WENV170961639
MLJW01000287
212101
Betaproteobacteria
GAT
Ile
>WENV170961666
MLJW01000403
185257
Betaproteobacteria
CAT
Met
>WENV170961697
MLJW01000556
192191
Betaproteobacteria
CAT
Met
>WENV170961703
MLJW01000583
212101
Betaproteobacteria
GAT
Ile
>WENV170961746
MLJW01000844
342564
Betaproteobacteria
CGC
Ala
>WENV170961759
MLJW01001005
177009
Betaproteobacteria
GGG
Pro
>WENV170961774
MLJW01001192
283942
Betaproteobacteria
CCA
Trp
>WENV170961783
MLJW01001260
328243
Betaproteobacteria
CCG
Arg
>WENV170961831
MLJW01002172
180176
Betaproteobacteria
CAT
Met
>WENV170961846
MLJW01002549
187036
Betaproteobacteria
CAT
Met
>WENV170961858
MLJW01002873
406663
Betaproteobacteria
CAC
Val
>WENV170961873
MLJW01003435
283985
Betaproteobacteria
CTT
Lys
>WENV170961877
MLJW01004181
177009
Betaproteobacteria
GGG
Pro
>WENV170961893
MLJW01005253
117806
Betaproteobacteria
GTA
Tyr
>WENV170961916
MLJW01006657
176778
Betaproteobacteria
GAT
Ile
>WENV170961936
MLJW01008579
368643
Betaproteobacteria
GCC
Gly
>WENV170961937
MLJW01008579
368643
Betaproteobacteria
GCC
Gly
>WENV170961940
MLJW01008750
120253
Betaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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