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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180045513
MOXS02137518
178510
Alphaproteobacteria
ACG
Arg
>WENV180045388
MOXS02115205
299458
Alphaproteobacteria
TTT
Lys
>WENV180045584
MOXS02146767
299458
Alphaproteobacteria
TTT
Lys
>WENV180045039
MOXS02073364
176225
Alphaproteobacteria
TGG
Pro
>WENV180044836
MOXS02045178
140876
Alphaproteobacteria
>WENV180045451
MOXS02126773
197241
Alphaproteobacteria
GGG
Pro
>WENV180045630
MOXS02153628
481268
Alphaproteobacteria
TCC
Gly
>WENV180045341
MOXS02108773
75222
Alphaproteobacteria
GAG
Leu
>WENV180044845
MOXS02046741
29702
Alphaproteobacteria
GGA
Ser
>WENV180045069
MOXS02075579
408543
Alphaproteobacteria
GAC
Val
>WENV180045040
MOXS02073434
400048
Alphaproteobacteria
GGT
Thr
>WENV180044712
MOXS02028099
398994
Alphaproteobacteria
GTT
Asn
>WENV180045554
MOXS02141931
308123
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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