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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180046489
MPLT02100240
221998
Alphaproteobacteria
GAT
Ile
>WENV180046667
MPLT02122104
225276
Alphaproteobacteria
GAT
Ile
>WENV180047192
MPLT02191454
221998
Alphaproteobacteria
GAT
Ile
>WENV180047431
MPLT02220281
308123
Alphaproteobacteria
CCA
Trp
>WENV180047442
MPLT02221202
435083
Alphaproteobacteria
>WENV180047568
MPLT02236304
178510
Alphaproteobacteria
ACG
Arg
>WENV180047985
MPLT02290601
193088
Alphaproteobacteria
GAT
Ile
>WENV180047989
MPLT02291006
360947
Alphaproteobacteria
TTT
Lys
>WENV180048141
MPLT02308557
201940
Alphaproteobacteria
CAT
Met
>WENV180048400
MPLT02345982
176225
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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