This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180049273
MPLU02048242
140876
Alphaproteobacteria
>WENV180050229
MPLU02120066
140893
Alphaproteobacteria
CAA
Leu
>WENV180052761
MPLU02323224
100184
Alphaproteobacteria
CAG
Leu
>WENV180049204
MPLU02043031
208947
Alphaproteobacteria
CAT
Met
>WENV180051533
MPLU02221745
180029
Alphaproteobacteria
CAT
Met
>WENV180049059
MPLU02031268
281650
Alphaproteobacteria
CCA
Trp
>WENV180051710
MPLU02239646
481096
Alphaproteobacteria
CCC
Gly
>WENV180050735
MPLU02164489
29727
Alphaproteobacteria
CGA
Ser
>WENV180050424
MPLU02137926
481098
Alphaproteobacteria
CTG
Gln
>WENV180053112
MPLU02346928
432650
Alphaproteobacteria
GAA
Phe
>WENV180052348
MPLU02290434
400515
Alphaproteobacteria
GAC
Val
>WENV180050478
MPLU02142974
100185
Alphaproteobacteria
GAG
Leu
>WENV180051661
MPLU02235540
193088
Alphaproteobacteria
GAT
Ile
>WENV180052865
MPLU02330781
221998
Alphaproteobacteria
GAT
Ile
>WENV180049576
MPLU02070291
481326
Alphaproteobacteria
GCA
Cys
>WENV180051713
MPLU02239837
398996
Alphaproteobacteria
GCC
Gly
>WENV180051222
MPLU02198688
29729
Alphaproteobacteria
GCT
Ser
>WENV180053135
MPLU02348736
29841
Alphaproteobacteria
GGA
Ser
>WENV180050391
MPLU02134873
178503
Alphaproteobacteria
GGG
Pro
>WENV180052162
MPLU02274355
281676
Alphaproteobacteria
TAC
Val
>WENV180051097
MPLU02188078
121250
Alphaproteobacteria
TAG
Leu
>WENV180051982
MPLU02260940
140892
Alphaproteobacteria
TAG
Leu
>WENV180052398
MPLU02295131
190609
Alphaproteobacteria
TCT
Arg
>WENV180052475
MPLU02302750
190614
Alphaproteobacteria
TGG
Pro
>WENV180052841
MPLU02329308
399000
Alphaproteobacteria
TTC
Glu
>WENV180052842
MPLU02329308
399000
Alphaproteobacteria
TTC
Glu
>WENV180050405
MPLU02136419
400514
Alphaproteobacteria
TTG
Gln
>WENV180051530
MPLU02221405
283510
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK