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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180050794
MPLU02170650
400818
Bacteroidota
TTC
Glu
>WENV180052981
MPLU02337030
281538
Bacteroidota
GAA
Phe
>WENV180049755
MPLU02083061
222068
Bacteroidota
GAT
Ile
>WENV180053010
MPLU02339509
156605
Bacteroidota
GAC
Val
>WENV180051854
MPLU02248741
240785
Bacteroidota
GTC
Asp
>WENV180053012
MPLU02339610
402171
Bacteroidota
TTC
Glu
>WENV180049089
MPLU02033516
155808
Bacteroidota
TGG
Pro
>WENV180049090
MPLU02033516
176812
Bacteroidota
TCT
Arg
>WENV180052767
MPLU02323398
235895
Bacteroidota
GTT
Asn
>WENV180050355
MPLU02131505
299065
Bacteroidota
TTG
Gln
>WENV180049851
MPLU02090706
231584
Bacteroidota
TCT
Arg
>WENV180052734
MPLU02321621
372845
Bacteroidota
CCA
Trp
>WENV180051498
MPLU02219347
372845
Bacteroidota
CCA
Trp
>WENV180050216
MPLU02119104
372845
Bacteroidota
CCA
Trp
>WENV180049960
MPLU02100865
408604
Bacteroidota
GGT
Thr
>WENV180050626
MPLU02155611
56162
Bacteroidota
TGA
Ser
>WENV180049728
MPLU02081614
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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