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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180057343
MPLX02000109
158246
Gammaproteobacteria
GTC
Asp
>WENV180057821
MPLX02023921
158246
Gammaproteobacteria
GTC
Asp
>WENV180057961
MPLX02029954
158246
Gammaproteobacteria
GTC
Asp
>WENV180058090
MPLX02035674
158246
Gammaproteobacteria
GTC
Asp
>WENV180061497
MPLX02228363
158246
Gammaproteobacteria
GTC
Asp
>WENV180058046
MPLX02033324
123265
Gammaproteobacteria
GAG
Leu
>WENV180059056
MPLX02088232
297858
Gammaproteobacteria
TGC
Ala
>WENV180064127
MPLX02396430
297858
Gammaproteobacteria
TGC
Ala
>WENV180064203
MPLX02401513
20273
Gammaproteobacteria
TGA
Ser
>WENV180061213
MPLX02212189
480653
Gammaproteobacteria
GCA
Cys
>WENV180063425
MPLX02353428
185999
Gammaproteobacteria
CCG
Arg
>WENV180063599
MPLX02363677
311084
Gammaproteobacteria
GCC
Gly
>WENV180063121
MPLX02332142
311084
Gammaproteobacteria
GCC
Gly
>WENV180062279
MPLX02277481
311084
Gammaproteobacteria
GCC
Gly
>WENV180064361
MPLX02411286
229289
Gammaproteobacteria
TGG
Pro
>WENV180057852
MPLX02025174
280912
Gammaproteobacteria
TGC
Ala
>WENV180063600
MPLX02363677
480629
Gammaproteobacteria
GCA
Cys
>WENV180062836
MPLX02312590
480629
Gammaproteobacteria
GCA
Cys
>WENV180062280
MPLX02277481
480629
Gammaproteobacteria
GCA
Cys
>WENV180059784
MPLX02132058
480629
Gammaproteobacteria
GCA
Cys
>WENV180059783
MPLX02132045
480629
Gammaproteobacteria
GCA
Cys
>WENV180061015
MPLX02201934
178168
Gammaproteobacteria
ACG
Arg
>WENV180060943
MPLX02197374
306288
Gammaproteobacteria
GCC
Gly
>WENV180062463
MPLX02288674
182374
Gammaproteobacteria
CAT
Met
>WENV180064281
MPLX02406170
334421
Gammaproteobacteria
TGT
Thr
>WENV180062517
MPLX02291680
177028
Gammaproteobacteria
CAT
Met
>WENV180057388
MPLX02002410
176301
Gammaproteobacteria
GAT
Ile
>WENV180057715
MPLX02019595
176301
Gammaproteobacteria
GAT
Ile
>WENV180057851
MPLX02025174
176301
Gammaproteobacteria
GAT
Ile
>WENV180061704
MPLX02240589
176301
Gammaproteobacteria
GAT
Ile
>WENV180061979
MPLX02257684
176301
Gammaproteobacteria
GAT
Ile
>WENV180062079
MPLX02264043
176301
Gammaproteobacteria
GAT
Ile
>WENV180060317
MPLX02162362
211156
Gammaproteobacteria
CGG
Pro
>WENV180062321
MPLX02279841
211156
Gammaproteobacteria
CGG
Pro
>WENV180063778
MPLX02375307
211156
Gammaproteobacteria
CGG
Pro
>WENV180063742
MPLX02372870
185695
Gammaproteobacteria
CAT
Met
>WENV180063914
MPLX02383059
201377
Gammaproteobacteria
TGG
Pro
>WENV180060013
MPLX02146215
201377
Gammaproteobacteria
TGG
Pro
>WENV180062634
MPLX02299876
281791
Gammaproteobacteria
GTG
His
>WENV180062582
MPLX02296706
281791
Gammaproteobacteria
GTG
His
>WENV180059740
MPLX02129562
349758
Gammaproteobacteria
GGC
Ala
>WENV180060414
MPLX02167651
349758
Gammaproteobacteria
GGC
Ala
>WENV180061224
MPLX02212512
349758
Gammaproteobacteria
GGC
Ala
>WENV180063935
MPLX02383858
349758
Gammaproteobacteria
GGC
Ala
>WENV180064302
MPLX02407530
349758
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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