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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180070761
MPLZ02189167
140876
Alphaproteobacteria
>WENV180071450
MPLZ02237510
73523
Alphaproteobacteria
CAG
Leu
>WENV180070987
MPLZ02203870
296763
Alphaproteobacteria
CCA
Trp
>WENV180071739
MPLZ02257200
481096
Alphaproteobacteria
CCC
Gly
>WENV180070839
MPLZ02193549
404712
Alphaproteobacteria
CCC
Gly
>WENV180067895
MPLZ02019618
29727
Alphaproteobacteria
CGA
Ser
>WENV180071981
MPLZ02274902
400515
Alphaproteobacteria
GAC
Val
>WENV180071721
MPLZ02256419
481326
Alphaproteobacteria
GCA
Cys
>WENV180072057
MPLZ02279720
419842
Alphaproteobacteria
GCC
Gly
>WENV180069671
MPLZ02123646
303339
Alphaproteobacteria
GGC
Ala
>WENV180070512
MPLZ02171855
178503
Alphaproteobacteria
GGG
Pro
>WENV180069193
MPLZ02092149
178725
Alphaproteobacteria
GTG
His
>WENV180068389
MPLZ02045073
405688
Alphaproteobacteria
GTT
Asn
>WENV180069155
MPLZ02089662
281676
Alphaproteobacteria
TAC
Val
>WENV180071016
MPLZ02207086
399000
Alphaproteobacteria
TTC
Glu
>WENV180071221
MPLZ02222153
399000
Alphaproteobacteria
TTC
Glu
>WENV180071264
MPLZ02224754
400514
Alphaproteobacteria
TTG
Gln
>WENV180072027
MPLZ02277935
283510
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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