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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180067633
MPLZ02007087
182374
Gammaproteobacteria
CAT
Met
>WENV180068267
MPLZ02039883
281791
Gammaproteobacteria
GTG
His
>WENV180068288
MPLZ02040801
480629
Gammaproteobacteria
GCA
Cys
>WENV180068675
MPLZ02061392
182374
Gammaproteobacteria
CAT
Met
>WENV180068743
MPLZ02065951
201377
Gammaproteobacteria
TGG
Pro
>WENV180068889
MPLZ02073086
201377
Gammaproteobacteria
TGG
Pro
>WENV180068893
MPLZ02073086
118414
Gammaproteobacteria
TAG
Leu
>WENV180068894
MPLZ02073086
319946
Gammaproteobacteria
TAC
Val
>WENV180068939
MPLZ02075725
211156
Gammaproteobacteria
CGG
Pro
>WENV180069021
MPLZ02080692
182374
Gammaproteobacteria
CAT
Met
>WENV180069176
MPLZ02091389
311084
Gammaproteobacteria
GCC
Gly
>WENV180069177
MPLZ02091389
480629
Gammaproteobacteria
GCA
Cys
>WENV180069303
MPLZ02098695
178168
Gammaproteobacteria
ACG
Arg
>WENV180069711
MPLZ02125847
319139
Gammaproteobacteria
GCC
Gly
>WENV180069744
MPLZ02127784
176301
Gammaproteobacteria
GAT
Ile
>WENV180069763
MPLZ02129057
297858
Gammaproteobacteria
TGC
Ala
>WENV180070151
MPLZ02152055
311084
Gammaproteobacteria
GCC
Gly
>WENV180070152
MPLZ02152055
480629
Gammaproteobacteria
GCA
Cys
>WENV180070342
MPLZ02162554
158246
Gammaproteobacteria
GTC
Asp
>WENV180070416
MPLZ02165892
158246
Gammaproteobacteria
GTC
Asp
>WENV180070471
MPLZ02169423
176301
Gammaproteobacteria
GAT
Ile
>WENV180070472
MPLZ02169423
280912
Gammaproteobacteria
TGC
Ala
>WENV180070750
MPLZ02188164
176301
Gammaproteobacteria
GAT
Ile
>WENV180070918
MPLZ02199307
201377
Gammaproteobacteria
TGG
Pro
>WENV180071018
MPLZ02207092
281791
Gammaproteobacteria
GTG
His
>WENV180071329
MPLZ02230245
123265
Gammaproteobacteria
GAG
Leu
>WENV180071692
MPLZ02253128
178164
Gammaproteobacteria
GAT
Ile
>WENV180071829
MPLZ02265186
281791
Gammaproteobacteria
GTG
His
>WENV180071868
MPLZ02267586
300318
Gammaproteobacteria
GGC
Ala
>WENV180071952
MPLZ02273320
123265
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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