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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180091151
MPMF02178338
208578
Cyanobacteriota
CGG
Pro
>WENV180091509
MPMF02199621
57522
Cyanobacteriota
CGA
Ser
>WENV180089404
MPMF02083068
326453
Cyanobacteriota
CGC
Ala
>WENV180088038
MPMF02009086
282452
Cyanobacteriota
GGC
Ala
>WENV180092217
MPMF02247432
282452
Cyanobacteriota
GGC
Ala
>WENV180092340
MPMF02254871
282452
Cyanobacteriota
GGC
Ala
>WENV180092756
MPMF02281081
282452
Cyanobacteriota
GGC
Ala
>WENV180089961
MPMF02112215
221462
Cyanobacteriota
CCT
Arg
>WENV180090305
MPMF02133384
221462
Cyanobacteriota
CCT
Arg
>WENV180089554
MPMF02090254
283430
Cyanobacteriota
CCA
Trp
>WENV180088096
MPMF02011924
414584
Cyanobacteriota
GAC
Val
>WENV180088094
MPMF02011896
414584
Cyanobacteriota
GAC
Val
>WENV180091615
MPMF02207611
414584
Cyanobacteriota
GAC
Val
>WENV180092849
MPMF02285917
414584
Cyanobacteriota
GAC
Val
>WENV180093790
MPMF02345377
414584
Cyanobacteriota
GAC
Val
>WENV180094013
MPMF02360785
38099
Cyanobacteriota
GGA
Ser
>WENV180093450
MPMF02322084
38099
Cyanobacteriota
GGA
Ser
>WENV180091304
MPMF02187283
38099
Cyanobacteriota
GGA
Ser
>WENV180089303
MPMF02076724
38099
Cyanobacteriota
GGA
Ser
>WENV180089390
MPMF02082445
38099
Cyanobacteriota
GGA
Ser
>WENV180089646
MPMF02094844
38099
Cyanobacteriota
GGA
Ser
>WENV180091228
MPMF02183131
38099
Cyanobacteriota
GGA
Ser
>WENV180089927
MPMF02110141
185359
Cyanobacteriota
TCT
Arg
>WENV180090073
MPMF02118919
185359
Cyanobacteriota
TCT
Arg
>WENV180092077
MPMF02238576
185359
Cyanobacteriota
TCT
Arg
>WENV180089976
MPMF02113539
292138
Cyanobacteriota
CCA
Trp
>WENV180090651
MPMF02150446
292138
Cyanobacteriota
CCA
Trp
>WENV180093666
MPMF02336113
292138
Cyanobacteriota
CCA
Trp
>WENV180091572
MPMF02204139
343795
Cyanobacteriota
GGC
Ala
>WENV180090071
MPMF02118804
283431
Cyanobacteriota
GTG
His
>WENV180090958
MPMF02167617
283431
Cyanobacteriota
GTG
His
>WENV180091271
MPMF02185430
283431
Cyanobacteriota
GTG
His
>WENV180091471
MPMF02196923
400477
Cyanobacteriota
GTT
Asn
>WENV180091063
MPMF02172814
400477
Cyanobacteriota
GTT
Asn
>WENV180089263
MPMF02074733
400477
Cyanobacteriota
GTT
Asn
>WENV180088425
MPMF02029205
400477
Cyanobacteriota
GTT
Asn
>WENV180088222
MPMF02019073
400477
Cyanobacteriota
GTT
Asn
>WENV180088130
MPMF02014316
400477
Cyanobacteriota
GTT
Asn
>WENV180092694
MPMF02275990
178673
Cyanobacteriota
CCG
Arg
>WENV180092074
MPMF02238161
178673
Cyanobacteriota
CCG
Arg
>WENV180092040
MPMF02236595
178673
Cyanobacteriota
CCG
Arg
>WENV180089772
MPMF02103732
178673
Cyanobacteriota
CCG
Arg
>WENV180088769
MPMF02046272
178673
Cyanobacteriota
CCG
Arg
>WENV180088113
MPMF02013419
185831
Cyanobacteriota
CAT
Met
>WENV180089159
MPMF02068262
185831
Cyanobacteriota
CAT
Met
>WENV180093911
MPMF02353330
185831
Cyanobacteriota
CAT
Met
>WENV180088143
MPMF02015002
73307
Cyanobacteriota
CAG
Leu
>WENV180089790
MPMF02105198
73307
Cyanobacteriota
CAG
Leu
>WENV180091779
MPMF02219484
73307
Cyanobacteriota
CAG
Leu
>WENV180091791
MPMF02220164
73307
Cyanobacteriota
CAG
Leu
>WENV180092885
MPMF02288748
73307
Cyanobacteriota
CAG
Leu
>WENV180093998
MPMF02359710
73307
Cyanobacteriota
CAG
Leu
>WENV180090684
MPMF02151820
185579
Cyanobacteriota
CAT
Met
>WENV180091042
MPMF02171594
185579
Cyanobacteriota
CAT
Met
>WENV180093165
MPMF02304656
185579
Cyanobacteriota
CAT
Met
>WENV180090652
MPMF02150446
177076
Cyanobacteriota
GTC
Asp
>WENV180089626
MPMF02093449
176367
Cyanobacteriota
GGG
Pro
>WENV180090052
MPMF02117722
176367
Cyanobacteriota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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