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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171002364
NHNJ01007315
186414
Alphaproteobacteria
CAT
Met
>WENV171002473
NHNJ01049654
186414
Alphaproteobacteria
CAT
Met
>WENV171002387
NHNJ01020474
29841
Alphaproteobacteria
GGA
Ser
>WENV171002445
NHNJ01043568
140876
Alphaproteobacteria
>WENV171002525
NHNJ01080650
140876
Alphaproteobacteria
>WENV171002366
NHNJ01008966
140893
Alphaproteobacteria
CAA
Leu
>WENV171002554
NHNJ01084650
481268
Alphaproteobacteria
TCC
Gly
>WENV171002580
NHNJ01089226
481268
Alphaproteobacteria
TCC
Gly
>WENV171002378
NHNJ01013907
75222
Alphaproteobacteria
GAG
Leu
>WENV171002597
NHNJ01093655
405688
Alphaproteobacteria
GTT
Asn
>WENV171002496
NHNJ01061017
179941
Alphaproteobacteria
CAT
Met
>WENV171002631
NHNJ01109699
178509
Alphaproteobacteria
CCT
Arg
>WENV171002501
NHNJ01063756
29729
Alphaproteobacteria
GCT
Ser
>WENV171002359
NHNJ01005840
29729
Alphaproteobacteria
GCT
Ser
>WENV171002647
NHNJ01116033
29729
Alphaproteobacteria
GCT
Ser
>WENV171002358
NHNJ01005743
435083
Alphaproteobacteria
>WENV171002434
NHNJ01042636
178503
Alphaproteobacteria
GGG
Pro
>WENV171002425
NHNJ01041767
281650
Alphaproteobacteria
CCA
Trp
>WENV171002617
NHNJ01101502
281650
Alphaproteobacteria
CCA
Trp
>WENV171002337
NHNJ01001484
329227
Alphaproteobacteria
TGC
Ala
>WENV171002491
NHNJ01057108
329227
Alphaproteobacteria
TGC
Ala
>WENV171002666
NHNJ01130281
121990
Alphaproteobacteria
TAG
Leu
>WENV171002433
NHNJ01042606
121990
Alphaproteobacteria
TAG
Leu
>WENV171002515
NHNJ01073085
29598
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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