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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180102709
OAOZ01006915
490292
Gammaproteobacteria
TCC
Gly
>WENV180103000
OAOZ01092789
335783
Gammaproteobacteria
GTT
Asn
>WENV180102810
OAOZ01019356
176301
Gammaproteobacteria
GAT
Ile
>WENV180102996
OAOZ01089294
211003
Gammaproteobacteria
ACG
Arg
>WENV180102803
OAOZ01017717
201377
Gammaproteobacteria
TGG
Pro
>WENV180102942
OAOZ01062269
282018
Gammaproteobacteria
TGT
Thr
>WENV180102730
OAOZ01007988
330472
Gammaproteobacteria
TAC
Val
>WENV180102728
OAOZ01007753
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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