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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180103783
OAPB01006183
186414
Alphaproteobacteria
CAT
Met
>WENV180103722
OAPB01001648
29841
Alphaproteobacteria
GGA
Ser
>WENV180103782
OAPB01006154
140876
Alphaproteobacteria
>WENV180103712
OAPB01000668
179390
Alphaproteobacteria
TGG
Pro
>WENV180104093
OAPB01078759
140893
Alphaproteobacteria
CAA
Leu
>WENV180103765
OAPB01004871
481268
Alphaproteobacteria
TCC
Gly
>WENV180103820
OAPB01010360
281659
Alphaproteobacteria
TGC
Ala
>WENV180103774
OAPB01005725
29729
Alphaproteobacteria
GCT
Ser
>WENV180103873
OAPB01018328
435083
Alphaproteobacteria
>WENV180103727
OAPB01002081
178503
Alphaproteobacteria
GGG
Pro
>WENV180104049
OAPB01064538
281650
Alphaproteobacteria
CCA
Trp
>WENV180104191
OAPB01116098
481326
Alphaproteobacteria
GCA
Cys
>WENV180103812
OAPB01008508
398994
Alphaproteobacteria
GTT
Asn
>WENV180103692
OAPB01000248
329227
Alphaproteobacteria
TGC
Ala
>WENV180103681
OAPB01000170
329227
Alphaproteobacteria
TGC
Ala
>WENV180103716
OAPB01001043
281676
Alphaproteobacteria
TAC
Val
>WENV180103824
OAPB01010761
413432
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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