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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180104597
OAPC01039507
186414
Alphaproteobacteria
CAT
Met
>WENV180104294
OAPC01000841
29841
Alphaproteobacteria
GGA
Ser
>WENV180104903
OAPC01168271
29841
Alphaproteobacteria
GGA
Ser
>WENV180104307
OAPC01001055
140876
Alphaproteobacteria
>WENV180104388
OAPC01005191
179390
Alphaproteobacteria
TGG
Pro
>WENV180104423
OAPC01007272
140893
Alphaproteobacteria
CAA
Leu
>WENV180104358
OAPC01003337
481268
Alphaproteobacteria
TCC
Gly
>WENV180104275
OAPC01000580
481268
Alphaproteobacteria
TCC
Gly
>WENV180104347
OAPC01002854
281659
Alphaproteobacteria
TGC
Ala
>WENV180104857
OAPC01145475
336350
Alphaproteobacteria
GAA
Phe
>WENV180104563
OAPC01029444
405688
Alphaproteobacteria
GTT
Asn
>WENV180104648
OAPC01053422
29729
Alphaproteobacteria
GCT
Ser
>WENV180104606
OAPC01040224
435083
Alphaproteobacteria
>WENV180104252
OAPC01000133
178503
Alphaproteobacteria
GGG
Pro
>WENV180104707
OAPC01077853
402067
Alphaproteobacteria
GCC
Gly
>WENV180104297
OAPC01000881
283510
Alphaproteobacteria
TTT
Lys
>WENV180104271
OAPC01000413
281650
Alphaproteobacteria
CCA
Trp
>WENV180104328
OAPC01001623
398994
Alphaproteobacteria
GTT
Asn
>WENV180104727
OAPC01083582
178799
Alphaproteobacteria
CAT
Met
>WENV180104262
OAPC01000294
329227
Alphaproteobacteria
TGC
Ala
>WENV180104443
OAPC01008720
329227
Alphaproteobacteria
TGC
Ala
>WENV180104365
OAPC01003508
281676
Alphaproteobacteria
TAC
Val
>WENV180104362
OAPC01003424
413432
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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