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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180104755
OAPC01093683
297858
Gammaproteobacteria
TGC
Ala
>WENV180104331
OAPC01001878
314350
Gammaproteobacteria
CCA
Trp
>WENV180104466
OAPC01010847
176796
Gammaproteobacteria
GGG
Pro
>WENV180104799
OAPC01114639
330614
Gammaproteobacteria
TTT
Lys
>WENV180104457
OAPC01009896
317782
Gammaproteobacteria
TAC
Val
>WENV180104509
OAPC01016869
210406
Gammaproteobacteria
ACG
Arg
>WENV180104459
OAPC01009896
338424
Gammaproteobacteria
TAC
Val
>WENV180104498
OAPC01015253
176301
Gammaproteobacteria
GAT
Ile
>WENV180104298
OAPC01000981
282018
Gammaproteobacteria
TGT
Thr
>WENV180104474
OAPC01011782
198943
Gammaproteobacteria
CAT
Met
>WENV180104367
OAPC01003547
331059
Gammaproteobacteria
>WENV180104568
OAPC01031764
283521
Gammaproteobacteria
GAA
Phe
>WENV180104518
OAPC01018853
179710
Gammaproteobacteria
GAC
Val
>WENV180104544
OAPC01025370
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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