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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180105767
OAPD01185657
292194
Gammaproteobacteria
GGT
Thr
>WENV180105042
OAPD01002413
282550
Gammaproteobacteria
TAC
Val
>WENV180105769
OAPD01187095
178471
Gammaproteobacteria
GTT
Asn
>WENV180104964
OAPD01000428
490292
Gammaproteobacteria
TCC
Gly
>WENV180105507
OAPD01080076
301990
Gammaproteobacteria
CAT
Met
>WENV180105717
OAPD01167671
316303
Gammaproteobacteria
TTT
Lys
>WENV180105385
OAPD01042635
285547
Gammaproteobacteria
TTG
Gln
>WENV180104962
OAPD01000428
282018
Gammaproteobacteria
TGT
Thr
>WENV180105338
OAPD01034181
81474
Gammaproteobacteria
CAG
Leu
>WENV180105669
OAPD01138700
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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