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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180107771
OAPH01006593
176545
Gammaproteobacteria
CAT
Met
>WENV180107772
OAPH01006635
285547
Gammaproteobacteria
TTG
Gln
>WENV180107811
OAPH01009158
20618
Gammaproteobacteria
GGA
Ser
>WENV180107829
OAPH01010852
13452
Gammaproteobacteria
GCT
Ser
>WENV180107902
OAPH01018233
176796
Gammaproteobacteria
GGG
Pro
>WENV180107999
OAPH01027987
178471
Gammaproteobacteria
GTT
Asn
>WENV180108000
OAPH01028088
180679
Gammaproteobacteria
CCA
Trp
>WENV180108157
OAPH01050963
176301
Gammaproteobacteria
GAT
Ile
>WENV180108171
OAPH01056025
282018
Gammaproteobacteria
TGT
Thr
>WENV180108241
OAPH01072572
282550
Gammaproteobacteria
TAC
Val
>WENV180108258
OAPH01077844
179710
Gammaproteobacteria
GAC
Val
>WENV180108303
OAPH01088106
141076
Gammaproteobacteria
GTA
Tyr
>WENV180108305
OAPH01088106
296672
Gammaproteobacteria
GGT
Thr
>WENV180108324
OAPH01095191
176301
Gammaproteobacteria
GAT
Ile
>WENV180108341
OAPH01097549
134404
Gammaproteobacteria
TAG
Leu
>WENV180108342
OAPH01097549
412223
Gammaproteobacteria
TTG
Gln
>WENV180108395
OAPH01106507
118640
Gammaproteobacteria
TAG
Leu
>WENV180108396
OAPH01106507
180681
Gammaproteobacteria
TGG
Pro
>WENV180108398
OAPH01106507
281908
Gammaproteobacteria
GTG
His
>WENV180108408
OAPH01109147
178472
Gammaproteobacteria
CAT
Met
>WENV180108426
OAPH01113868
73055
Gammaproteobacteria
TAA
Leu
>WENV180108427
OAPH01113868
480397
Gammaproteobacteria
GCA
Cys
>WENV180108453
OAPH01125006
299414
Gammaproteobacteria
TTT
Lys
>WENV180108461
OAPH01126986
285837
Gammaproteobacteria
TAC
Val
>WENV180108462
OAPH01126986
282683
Gammaproteobacteria
GGC
Ala
>WENV180108473
OAPH01131810
20487
Gammaproteobacteria
TGA
Ser
>WENV180108479
OAPH01134323
292006
Gammaproteobacteria
TGC
Ala
>WENV180108487
OAPH01138159
180680
Gammaproteobacteria
GAC
Val
>WENV180108559
OAPH01178593
243308
Gammaproteobacteria
TGG
Pro
>WENV180108595
OAPH01196641
74048
Gammaproteobacteria
CAA
Leu
>WENV180108613
OAPH01207046
238652
Gammaproteobacteria
CAT
Met
>WENV180108614
OAPH01207046
280808
Gammaproteobacteria
>WENV180108619
OAPH01208605
118640
Gammaproteobacteria
TAG
Leu
>WENV180108620
OAPH01208605
285547
Gammaproteobacteria
TTG
Gln
>WENV180108630
OAPH01213898
300318
Gammaproteobacteria
GGC
Ala
>WENV180108634
OAPH01215322
351236
Gammaproteobacteria
TTT
Lys
>WENV180108646
OAPH01224703
400763
Gammaproteobacteria
TTG
Gln
>WENV180108647
OAPH01224703
179284
Gammaproteobacteria
CAT
Met
>WENV180108762
OAPH01279744
280808
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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