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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180109193
OAPJ01024102
29841
Alphaproteobacteria
GGA
Ser
>WENV180109129
OAPJ01011381
140963
Alphaproteobacteria
>WENV180109219
OAPJ01032328
75222
Alphaproteobacteria
GAG
Leu
>WENV180109037
OAPJ01000681
399480
Alphaproteobacteria
GAA
Phe
>WENV180109339
OAPJ01085528
281659
Alphaproteobacteria
TGC
Ala
>WENV180109204
OAPJ01028288
400514
Alphaproteobacteria
TTG
Gln
>WENV180109127
OAPJ01010732
179386
Alphaproteobacteria
TCT
Arg
>WENV180109113
OAPJ01008714
29729
Alphaproteobacteria
GCT
Ser
>WENV180109033
OAPJ01000423
178503
Alphaproteobacteria
GGG
Pro
>WENV180109137
OAPJ01013272
281676
Alphaproteobacteria
TAC
Val
>WENV180109221
OAPJ01032682
281676
Alphaproteobacteria
TAC
Val
>WENV180109101
OAPJ01006509
178784
Alphaproteobacteria
CAT
Met
>WENV180109177
OAPJ01020353
283255
Alphaproteobacteria
GGC
Ala
>WENV180109350
OAPJ01088620
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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