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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180109447
OAPK01003751
480941
Gammaproteobacteria
TCC
Gly
>WENV180109452
OAPK01004233
292194
Gammaproteobacteria
GGT
Thr
>WENV180109529
OAPK01009620
351236
Gammaproteobacteria
TTT
Lys
>WENV180109684
OAPK01051050
292006
Gammaproteobacteria
TGC
Ala
>WENV180109724
OAPK01071913
176610
Gammaproteobacteria
ACG
Arg
>WENV180109683
OAPK01051050
176301
Gammaproteobacteria
GAT
Ile
>WENV180109652
OAPK01037045
179710
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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