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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180110158
OAPM01000653
140963
Alphaproteobacteria
>WENV180110110
OAPM01000043
201940
Alphaproteobacteria
CAT
Met
>WENV180110417
OAPM01049035
197241
Alphaproteobacteria
GGG
Pro
>WENV180110198
OAPM01002025
481268
Alphaproteobacteria
TCC
Gly
>WENV180110119
OAPM01000125
75222
Alphaproteobacteria
GAG
Leu
>WENV180110121
OAPM01000142
399480
Alphaproteobacteria
GAA
Phe
>WENV180110107
OAPM01000015
400384
Alphaproteobacteria
TTC
Glu
>WENV180110146
OAPM01000485
179941
Alphaproteobacteria
CAT
Met
>WENV180110108
OAPM01000027
435083
Alphaproteobacteria
>WENV180110356
OAPM01021303
281650
Alphaproteobacteria
CCA
Trp
>WENV180110118
OAPM01000106
212319
Alphaproteobacteria
GTG
His
>WENV180110147
OAPM01000485
398994
Alphaproteobacteria
GTT
Asn
>WENV180110339
OAPM01018147
296763
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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