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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180112444
OAPP01023303
232119
Gammaproteobacteria
ACG
Arg
>WENV180112447
OAPP01023855
284131
Gammaproteobacteria
GCC
Gly
>WENV180112568
OAPP01040224
282550
Gammaproteobacteria
TAC
Val
>WENV180112661
OAPP01063363
134404
Gammaproteobacteria
TAG
Leu
>WENV180112663
OAPP01063514
282902
Gammaproteobacteria
TGT
Thr
>WENV180112732
OAPP01088621
176610
Gammaproteobacteria
ACG
Arg
>WENV180112735
OAPP01089231
355552
Gammaproteobacteria
TTC
Glu
>WENV180112764
OAPP01103004
22069
Gammaproteobacteria
TGA
Ser
>WENV180112882
OAPP01156274
178544
Gammaproteobacteria
CAT
Met
>WENV180112883
OAPP01156274
118640
Gammaproteobacteria
TAG
Leu
>WENV180112884
OAPP01156274
285547
Gammaproteobacteria
TTG
Gln
>WENV180112896
OAPP01163720
180719
Gammaproteobacteria
ACG
Arg
>WENV180112932
OAPP01177770
92638
Gammaproteobacteria
TAA
Leu
>WENV180112946
OAPP01191101
180681
Gammaproteobacteria
TGG
Pro
>WENV180112974
OAPP01211576
178471
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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