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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180113596
OAPR01001241
29841
Alphaproteobacteria
GGA
Ser
>WENV180113862
OAPR01039512
140876
Alphaproteobacteria
>WENV180113615
OAPR01002209
481268
Alphaproteobacteria
TCC
Gly
>WENV180113997
OAPR01096011
400514
Alphaproteobacteria
TTG
Gln
>WENV180114057
OAPR01128054
178503
Alphaproteobacteria
GGG
Pro
>WENV180114087
OAPR01147045
402067
Alphaproteobacteria
GCC
Gly
>WENV180113588
OAPR01000866
281650
Alphaproteobacteria
CCA
Trp
>WENV180113633
OAPR01003393
281676
Alphaproteobacteria
TAC
Val
>WENV180114077
OAPR01140612
179638
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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