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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180115112
OAPS01130309
140876
Alphaproteobacteria
>WENV180114315
OAPS01003951
201940
Alphaproteobacteria
CAT
Met
>WENV180115002
OAPS01093295
180029
Alphaproteobacteria
CAT
Met
>WENV180115070
OAPS01114352
178509
Alphaproteobacteria
CCT
Arg
>WENV180114864
OAPS01058441
282748
Alphaproteobacteria
CGT
Thr
>WENV180115005
OAPS01093554
399480
Alphaproteobacteria
GAA
Phe
>WENV180114666
OAPS01030284
78115
Alphaproteobacteria
GAG
Leu
>WENV180114871
OAPS01060035
197241
Alphaproteobacteria
GGG
Pro
>WENV180114776
OAPS01044268
291892
Alphaproteobacteria
TAC
Val
>WENV180114235
OAPS01001279
481802
Alphaproteobacteria
TCC
Gly
>WENV180115280
OAPS01191971
481268
Alphaproteobacteria
TCC
Gly
>WENV180114340
OAPS01005095
281659
Alphaproteobacteria
TGC
Ala
>WENV180114969
OAPS01084975
401037
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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