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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180117151
OARD01000073
400161
Bacteroidota
GGT
Thr
>WENV180117146
OARD01000039
118221
Bacteroidota
CAA
Leu
>WENV180117144
OARD01000032
56385
Bacteroidota
TGA
Ser
>WENV180117223
OARD01003509
431429
Bacteroidota
CCT
Arg
>WENV180117152
OARD01000073
312035
Bacteroidota
CCA
Trp
>WENV180117175
OARD01000227
242241
Bacteroidota
GTC
Asp
>WENV180117174
OARD01000227
242241
Bacteroidota
GTC
Asp
>WENV180117173
OARD01000227
242241
Bacteroidota
GTC
Asp
>WENV180117172
OARD01000226
404109
Bacteroidota
CTC
Glu
>WENV180117171
OARD01000226
404109
Bacteroidota
CTC
Glu
>WENV180117170
OARD01000226
404109
Bacteroidota
CTC
Glu
>WENV180117142
OARD01000020
46648
Bacteroidota
TAA
Leu
>WENV180117217
OARD01002915
118220
Bacteroidota
GTA
Tyr
>WENV180117164
OARD01000171
481328
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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