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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180117683
OARM01000002
99943
Gammaproteobacteria
CAG
Leu
>WENV180117687
OARM01000002
99943
Gammaproteobacteria
CAG
Leu
>WENV180117695
OARM01000006
117925
Gammaproteobacteria
CAA
Leu
>WENV180117676
OARM01000001
280808
Gammaproteobacteria
>WENV180117678
OARM01000001
280808
Gammaproteobacteria
>WENV180117792
OARM01000078
280808
Gammaproteobacteria
>WENV180117793
OARM01000078
280808
Gammaproteobacteria
>WENV180117794
OARM01000078
280808
Gammaproteobacteria
>WENV180117796
OARM01000078
280808
Gammaproteobacteria
>WENV180117758
OARM01000050
176173
Gammaproteobacteria
>WENV180117968
OARM01050641
317362
Gammaproteobacteria
GGC
Ala
>WENV180117936
OARM01002787
400392
Gammaproteobacteria
TTT
Lys
>WENV180117787
OARM01000073
9399
Gammaproteobacteria
GCT
Ser
>WENV180117816
OARM01000157
280672
Gammaproteobacteria
GGT
Thr
>WENV180117684
OARM01000002
117926
Gammaproteobacteria
TAG
Leu
>WENV180117689
OARM01000002
117926
Gammaproteobacteria
TAG
Leu
>WENV180117692
OARM01000005
117926
Gammaproteobacteria
TAG
Leu
>WENV180117969
OARM01050851
117926
Gammaproteobacteria
TAG
Leu
>WENV180117703
OARM01000011
56104
Gammaproteobacteria
GGA
Ser
>WENV180117834
OARM01000308
328105
Gammaproteobacteria
GGT
Thr
>WENV180117671
OARM01000001
133571
Gammaproteobacteria
>WENV180117672
OARM01000001
133571
Gammaproteobacteria
>WENV180117673
OARM01000001
133571
Gammaproteobacteria
>WENV180117674
OARM01000001
133571
Gammaproteobacteria
>WENV180117832
OARM01000308
133571
Gammaproteobacteria
>WENV180117764
OARM01000051
242463
Gammaproteobacteria
TCT
Arg
>WENV180117726
OARM01000025
280812
Gammaproteobacteria
GAA
Phe
>WENV180117730
OARM01000025
280812
Gammaproteobacteria
GAA
Phe
>WENV180117785
OARM01000073
10334
Gammaproteobacteria
GCT
Ser
>WENV180117677
OARM01000001
83163
Gammaproteobacteria
TAA
Leu
>WENV180117747
OARM01000041
83163
Gammaproteobacteria
TAA
Leu
>WENV180117680
OARM01000002
176209
Gammaproteobacteria
GGG
Pro
>WENV180117722
OARM01000020
176610
Gammaproteobacteria
ACG
Arg
>WENV180117788
OARM01000073
176610
Gammaproteobacteria
ACG
Arg
>WENV180117786
OARM01000073
176613
Gammaproteobacteria
ACG
Arg
>WENV180117723
OARM01000020
140787
Gammaproteobacteria
GAG
Leu
>WENV180117795
OARM01000078
238652
Gammaproteobacteria
CAT
Met
>WENV180117798
OARM01000078
238652
Gammaproteobacteria
CAT
Met
>WENV180117763
OARM01000051
238586
Gammaproteobacteria
TCG
Arg
>WENV180117865
OARM01000607
238586
Gammaproteobacteria
TCG
Arg
>WENV180117937
OARM01002787
280851
Gammaproteobacteria
TAC
Val
>WENV180117681
OARM01000002
20236
Gammaproteobacteria
TGA
Ser
>WENV180117704
OARM01000012
20236
Gammaproteobacteria
TGA
Ser
>WENV180117685
OARM01000002
404694
Gammaproteobacteria
>WENV180117688
OARM01000002
404694
Gammaproteobacteria
>WENV180117670
OARM01000001
297131
Gammaproteobacteria
GTT
Asn
>WENV180117693
OARM01000005
218621
Gammaproteobacteria
TGG
Pro
>WENV180117707
OARM01000012
218621
Gammaproteobacteria
TGG
Pro
>WENV180117709
OARM01000012
218621
Gammaproteobacteria
TGG
Pro
>WENV180117679
OARM01000002
176854
Gammaproteobacteria
TCT
Arg
>WENV180117789
OARM01000073
281529
Gammaproteobacteria
CAT
Met
>WENV180117690
OARM01000002
399397
Gammaproteobacteria
>WENV180117675
OARM01000001
480510
Gammaproteobacteria
>WENV180117746
OARM01000041
480510
Gammaproteobacteria
>WENV180117748
OARM01000041
480510
Gammaproteobacteria
>WENV180117960
OARM01019571
176612
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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