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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180118616
OASD01000134
37928
Gammaproteobacteria
CGA
Ser
>WENV180118560
OASD01000061
195476
Gammaproteobacteria
GAC
Val
>WENV180119018
OASD01005549
233649
Gammaproteobacteria
TCT
Arg
>WENV180119142
OASD01013708
285536
Gammaproteobacteria
GGC
Ala
>WENV180118664
OASD01000274
297131
Gammaproteobacteria
GTT
Asn
>WENV180118665
OASD01000274
297131
Gammaproteobacteria
GTT
Asn
>WENV180119017
OASD01005549
183704
Gammaproteobacteria
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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